RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CXorf40AQ8TE69 158 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 FNIP1Q8TF40 1166 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 FAM172AQ8WUF8 416 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 MCEEQ96PE7 176 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 FMO2Q99518 471 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 SLC13A1Q9BZW2 595 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 DDX56Q9NY93 547 aaKnown RBP12.7□□□□□ -0.38
CTSD-208ENST00000636843 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.7□□□□□ -0.38
CTSD-208ENST00000636843 SATB2Q9UPW6 733 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 PCDHGA8Q9Y5G5 932 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 ENTPD2Q9Y5L3 495 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 KALRNO60229 2985 aa12.7□□□□□ -0.38
CTSD-208ENST00000636843 TCRBV7S2A1N4TA0A589 114 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 GOLGA6CA6NDK9 693 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 MUSKO15146 869 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 GCATO75600 419 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 ECEL1O95672 775 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 IGSF6O95976 241 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 GOLGA6DP0CG33 693 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 TIMP2P16035 220 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 BLKP51451 505 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 YBEYP58557 167 aaPredicted RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 TAS2R40P59535 323 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 COPS2P61201 443 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 RPL7AP62424 266 aaKnown RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 TAF1BQ53T94 588 aaPredicted RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 C3orf38Q5JPI3 329 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 C6orf132Q5T0Z8 1188 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 FAXCQ5TGI0 409 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 ESRP1Q6NXG1 681 aaKnown RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 LEKR1Q6ZMV7 388 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 MACC1Q6ZN28 852 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 ZNF771Q7L3S4 317 aaPredicted RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 ZNF354CQ86Y25 554 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 CCDC50Q8IVM0 306 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 SLC35F3Q8IY50 421 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 RBFAQ8N0V3 343 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 RTL3Q8N8U3 475 aaKnown RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 FAM76AQ8TAV0 307 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 CCDC97Q96F63 343 aaPredicted RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 ATXN7L3BQ96GX2 97 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 SLC46A1Q96NT5 459 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 LRRC61Q9BV99 259 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 MAGEB5Q9BZ81 275 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 CPEB1Q9BZB8 566 aaKnown RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 TCEAL2Q9H3H9 227 aaPredicted RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 ZDHHC18Q9NUE0 388 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 GOLGA6AQ9NYA3 693 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 MTRF1LQ9UGC7 380 aaKnown RBP12.69□□□□□ -0.38
CTSD-208ENST00000636843 CHD5Q8TDI0 1954 aa12.69□□□□□ -0.38
CTSD-208ENST00000636843 KLK10O43240 276 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 MMP20O60882 483 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 PPFIA2O75334 1257 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 GPD1P21695 349 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 EPHB2P29323 1055 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 RFC1P35251 1148 aaPredicted RBP12.68□□□□□ -0.38
CTSD-208ENST00000636843 HSD17B3P37058 310 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 SSR1P43307 286 aaKnown RBP12.68□□□□□ -0.38
CTSD-208ENST00000636843 RHOAP61586 193 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 SKOR1P84550 965 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 PPARDQ03181 441 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 CFHR1Q03591 330 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 ELP6Q0PNE2 266 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 KLF1Q13351 362 aaPredicted RBP12.68□□□□□ -0.38
CTSD-208ENST00000636843 C1orf61Q13536 156 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 GRM3Q14832 879 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 CCNG2Q16589 344 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 TMEM52BQ4KMG9 183 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 EFHC2Q5JST6 749 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 PERM1Q5SV97 790 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 ARHGAP40Q5TG30 622 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 PCSK4Q6UW60 755 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 TMC3Q7Z5M5 1100 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 ZNF605Q86T29 641 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 SDR16C5Q8N3Y7 309 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 FSTL5Q8N475 847 aaPredicted RBP12.68□□□□□ -0.38
CTSD-208ENST00000636843 TP53I13Q8NBR0 393 aaPredicted RBP12.68□□□□□ -0.38
CTSD-208ENST00000636843 HCAR2Q8TDS4 363 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 SNRNP27Q8WVK2 155 aaKnown RBP12.68□□□□□ -0.38
CTSD-208ENST00000636843 EPAS1Q99814 870 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 OSBPL8Q9BZF1 889 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 TRIM31Q9BZY9 425 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 NOL6Q9H6R4 1146 aaKnown RBP12.68□□□□□ -0.38
CTSD-208ENST00000636843 CPNE5Q9HCH3 593 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 MBNL1Q9NR56 388 aaKnown RBP12.68□□□□□ -0.38
CTSD-208ENST00000636843 PADI4Q9UM07 663 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 PLAAQ9Y263 795 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 MGAQ8IWI9 3026 aa12.68□□□□□ -0.38
CTSD-208ENST00000636843 A0A1W2PNU3 283 aaPredicted RBP12.67□□□□□ -0.38
CTSD-208ENST00000636843 WASH4PA8MWX3 477 aa12.67□□□□□ -0.38
CTSD-208ENST00000636843 YY2O15391 372 aa12.67□□□□□ -0.38
CTSD-208ENST00000636843 GJB6O95452 261 aa12.67□□□□□ -0.38
CTSD-208ENST00000636843 GAS8O95995 478 aa12.67□□□□□ -0.38
CTSD-208ENST00000636843 TSHRP16473 764 aa12.67□□□□□ -0.38
CTSD-208ENST00000636843 XPAP23025 273 aaPredicted RBP12.67□□□□□ -0.38
CTSD-208ENST00000636843 PTPN7P35236 360 aa12.67□□□□□ -0.38
CTSD-208ENST00000636843 GYS2P54840 703 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms