RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 ATE1O95260 518 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 IPO7O95373 1038 aaKnown RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 POP4O95707 220 aaKnown RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 LY86O95711 162 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 BPNT1O95861 308 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CLPTM1O96005 669 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 IGKV2D-40P01614 121 aaPredicted RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 RAF1P04049 648 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 NEFLP07196 543 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CENPBP07199 599 aaPredicted RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 DANCRP0C864 163 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 THEGLP0DJG4 465 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 IGHV4-30-4P0DP06 118 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 UMPSP11172 480 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 IFITM1P13164 125 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TCF3P15923 654 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CBR1P16152 277 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ATF7P17544 494 aaPredicted RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CHRNB2P17787 502 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TNFAIP3P21580 790 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 KCNA3P22001 575 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 AADACP22760 399 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ACAT1P24752 427 aaKnown RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 SSTR2P30874 369 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CALCRP30988 508 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 SOX9P48436 509 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 MEOX2P50222 304 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CLCN4P51793 760 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ITGA8P53708 1063 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TERF1P54274 439 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 BCAT1P54687 386 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TMEM50BP56557 158 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 PER3P56645 1201 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ERVK-16P61578 105 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ACTA2P62736 377 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ACTC1P68032 377 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 FAM193AP78312 1265 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ALDH6A1Q02252 535 aaKnown RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CD164Q04900 197 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CD69Q07108 199 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF543Q08ER8 600 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 IL15RAQ13261 267 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ARHGEF7Q14155 803 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TFDP1Q14186 410 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 FKBP8Q14318 412 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 RASA3Q14644 834 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 DRAP1Q14919 205 aaPredicted RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TSC22D1Q15714 1073 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ENOX2Q16206 610 aaKnown RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 AMHR2Q16671 573 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 DUSP6Q16828 381 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF181Q2M3W8 571 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 LETM2Q2VYF4 491 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 HLA-BQ31612 363 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TIMM50Q3ZCQ8 353 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 GTDC1Q4AE62 458 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 FIGNQ5HY92 759 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TECRLQ5HYJ1 363 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TSPO2Q5TGU0 170 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 VWA5B1Q5TIE3 1220 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 VPS53Q5VIR6 699 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TMEM198Q66K66 360 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 KIAA1841Q6NSI8 718 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TRNP1Q6NT89 227 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF529Q6P280 563 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 PGBD2Q6P3X8 592 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF880Q6PDB4 577 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 C16orf87Q6PH81 154 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 SLC4A10Q6U841 1118 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CDHR3Q6ZTQ4 885 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 EP400NLQ6ZTU2 488 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 UNC13DQ70J99 1090 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TAOK1Q7L7X3 1001 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 SLC46A3Q7Z3Q1 461 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 KCTD20Q7Z5Y7 419 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ADAT2Q7Z6V5 191 aaKnown RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CAMK1DQ8IU85 385 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 UEVLDQ8IX04 471 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CCDC36Q8IYA8 594 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 OSR2Q8N2R0 312 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ZCCHC9Q8N567 271 aaKnown RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 RNF149Q8NC42 400 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 C3orf58Q8NDZ4 430 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 OR10G8Q8NGN5 311 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 RNASE11Q8TAA1 199 aaKnown RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 GPR119Q8TDV5 335 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 SH3RF2Q8TEC5 729 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ATP8B4Q8TF62 1192 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 HDAC7Q8WUI4 952 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 PLAC4Q8WY50 150 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ERCC4Q92889 916 aaPredicted RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 AZIN2Q96A70 460 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TMEM19Q96HH6 336 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF597Q96LX8 424 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 FAM173AQ9BQD7 235 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TINF2Q9BSI4 451 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 UBAC1Q9BSL1 405 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 SOX7Q9BT81 388 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 DPCDQ9BVM2 203 aaPredicted RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 GNL3Q9BVP2 549 aaKnown RBP eCLIP-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms