RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 GABRB2P47870 512 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 PNOCQ13519 176 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 FAM102AQ5T9C2 384 aaPredicted RBP18.1■□□□□ 0.49
CLN6-212ENST00000636020 PAPD7Q5XG87 772 aaKnown RBP18.1■□□□□ 0.49
CLN6-212ENST00000636020 ZNF354CQ86Y25 554 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 TRIM59Q8IWR1 403 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 Q8NA96 180 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 TTC13Q8NBP0 860 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 GALNT6Q8NCL4 622 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 NCSTNQ92542 709 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 MARVELD3Q96A59 401 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 RNF31Q96EP0 1072 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 C5orf34Q96MH7 638 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 MAGEB5Q9BZ81 275 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 GOLPH3LQ9H4A5 285 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 PHPT1Q9NRX4 125 aaPredicted RBP18.1■□□□□ 0.49
CLN6-212ENST00000636020 PLEKHM1Q9Y4G2 1056 aa18.1■□□□□ 0.49
CLN6-212ENST00000636020 HNRNPRO43390 633 aaKnown RBP18.09■□□□□ 0.49
CLN6-212ENST00000636020 LRIG2O94898 1065 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 VARSP26640 1264 aaKnown RBP18.09■□□□□ 0.49
CLN6-212ENST00000636020 KRT9P35527 623 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 ACTR1BP42025 376 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 ACTR1AP61163 376 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 RAB6CQ53S08 254 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.09■□□□□ 0.49
CLN6-212ENST00000636020 JMJD6Q6NYC1 403 aaPredicted RBP18.09■□□□□ 0.49
CLN6-212ENST00000636020 SLC47A2Q86VL8 602 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 XYLT1Q86Y38 959 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 SLC37A2Q8TED4 501 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 SHC3Q92529 594 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 RAB6CQ9H0N0 254 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 PLCB1Q9NQ66 1216 aa18.09■□□□□ 0.49
CLN6-212ENST00000636020 TRBV23OR9-2A0A075B6M9 112 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 IVLP07476 585 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 ERCC5P28715 1186 aaPredicted RBP18.08■□□□□ 0.48
CLN6-212ENST00000636020 LEPRP48357 1165 aaKnown RBP18.08■□□□□ 0.48
CLN6-212ENST00000636020 POLD2P49005 469 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 PTK2Q05397 1052 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 ACOX1Q15067 660 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 DPPA4Q7L190 304 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 ZC3H18Q86VM9 953 aaKnown RBP18.08■□□□□ 0.48
CLN6-212ENST00000636020 TP53INP2Q8IXH6 220 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 SFRP1Q8N474 314 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 C18orf8Q96DM3 657 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 TBC1D31Q96DN5 1066 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 SPATA32Q96LK8 384 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 FAM81BQ96LP2 452 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 COQ10AQ96MF6 247 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 GSDMAQ96QA5 445 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 TUBGCP5Q96RT8 1024 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 LUZP4Q9P127 313 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 TMEM59LQ9UK28 342 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 SLC17A4Q9Y2C5 497 aa18.08■□□□□ 0.48
CLN6-212ENST00000636020 A6NCN8 305 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 CBX6O95503 412 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 MARSP56192 900 aaKnown RBP18.07■□□□□ 0.48
CLN6-212ENST00000636020 CDK3Q00526 305 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 PKP1Q13835 747 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 NR6A1Q15406 480 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 CPZQ66K79 652 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 ECHDC3Q96DC8 303 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 STAMBPL1Q96FJ0 436 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 SCARF2Q96GP6 870 aaPredicted RBP18.07■□□□□ 0.48
CLN6-212ENST00000636020 SLAMF7Q9NQ25 335 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 MAP10Q9P2G4 905 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 KLHL3Q9UH77 587 aa18.07■□□□□ 0.48
CLN6-212ENST00000636020 A8MX80 341 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 PSMA7O14818 248 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 LRCH4O75427 683 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 MAP3K6O95382 1288 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 PLEKP08567 350 aaPredicted RBP18.06■□□□□ 0.48
CLN6-212ENST00000636020 CCL11P51671 97 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 ATP11AP98196 1134 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 FOXM1Q08050 763 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 CHAF1BQ13112 559 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 DNASE1L3Q13609 305 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 NAA30Q147X3 362 aaPredicted RBP18.06■□□□□ 0.48
CLN6-212ENST00000636020 TRIM65Q6PJ69 517 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 ARCQ7LC44 396 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 PHLDB2Q86SQ0 1253 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 NUS1Q96E22 293 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 DHTKD1Q96HY7 919 aaPredicted RBP18.06■□□□□ 0.48
CLN6-212ENST00000636020 SCAND2PQ9GZW5 306 aaPredicted RBP18.06■□□□□ 0.48
CLN6-212ENST00000636020 ENTPD4Q9Y227 616 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 ZNF451Q9Y4E5 1061 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.06■□□□□ 0.48
CLN6-212ENST00000636020 POLEQ07864 2286 aa18.06■□□□□ 0.48
CLN6-212ENST00000636020 MTORP42345 2549 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 DIDO1Q9BTC0 2240 aaKnown RBP18.05■□□□□ 0.48
CLN6-212ENST00000636020 ARHGAP10A1A4S6 786 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 RASA4BC9J798 803 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 RASA4O43374 803 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 KIAA0754O94854 1291 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 ANKRD34CP0C6C1 535 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 NFKBIAP25963 317 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 SERPINA4P29622 427 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 CASP14P31944 242 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 CDH5P33151 784 aaPredicted RBP18.05■□□□□ 0.48
CLN6-212ENST00000636020 CLCN1P35523 988 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 CSNK1DP48730 415 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms