RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 AURKAO14965 403 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 AXIN1O15169 862 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 SPINT1O43278 529 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 BUD23O43709 281 aaKnown RBP14.45□□□□□ -0.1
LINC00339-208ENST00000634934 ZNF217O75362 1048 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 TCEA3O75764 348 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 PCDH8O95206 1070 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 CLDN7O95471 211 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 LHCGRP22888 699 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 MAGEA3P43357 314 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 TAS2R38P59533 333 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 CSTF1Q05048 431 aaKnown RBP14.45□□□□□ -0.1
LINC00339-208ENST00000634934 DMWDQ09019 674 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 MSLNQ13421 630 aaPredicted RBP14.45□□□□□ -0.1
LINC00339-208ENST00000634934 LRRC66Q68CR7 880 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 PPHLN1Q8NEY8 458 aaKnown RBP14.45□□□□□ -0.1
LINC00339-208ENST00000634934 BRSK1Q8TDC3 778 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 CXorf40AQ8TE69 158 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 LYSMD1Q96S90 227 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 FOXP3Q9BZS1 431 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 BTBD1Q9H0C5 482 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 TRABDQ9H4I3 376 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 ZFYVE1Q9HBF4 777 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 SAYSD1Q9NPB0 183 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 PRMT8Q9NR22 394 aaPredicted RBP14.45□□□□□ -0.1
LINC00339-208ENST00000634934 ARL5AQ9Y689 179 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 TBC1D3DA0A087WVF3 549 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TBC1D3IA0A087WXS9 549 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TBC1D3EA0A087X179 549 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TBC1D3KA0A087X1G2 549 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 HEATR9A2RTY3 570 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TBC1D3FA6NER0 549 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-208ENST00000634934 C2orf81A6NN90 581 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TBC1D3LB9A6J9 549 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TSPAN6O43657 245 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 PLRG1O43660 514 aaKnown RBP14.44□□□□□ -0.1
LINC00339-208ENST00000634934 AP1G1O43747 822 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 MMP20O60882 483 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 CRTAMO95727 393 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 ELFN1P0C7U0 828 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TBC1D3HP0C7X1 549 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 ADRA1DP25100 572 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 OXTRP30559 389 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 ACSL1P33121 698 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 NUBP1P53384 320 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 ADPRHP54922 357 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 ACTN3Q08043 901 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-208ENST00000634934 RALGDSQ12967 914 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TAF1AQ15573 450 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-208ENST00000634934 CNGA3Q16281 694 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 KRT71Q3SY84 523 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 PCID2Q5JVF3 399 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 ICE2Q659A1 982 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TBC1D3GQ6DHY5 549 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TBC1D3CQ6IPX1 549 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 CEP128Q6ZU80 1094 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 RELL1Q8IUW5 271 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 ANKMY2Q8IV38 441 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 ZBED8Q8IZ13 594 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TBC1D3Q8IZP1 549 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-208ENST00000634934 AGGF1Q8N302 714 aaeCLIP14.44□□□□□ -0.1
LINC00339-208ENST00000634934 FAM131CQ96AQ9 280 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 SIGLEC10Q96LC7 697 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 SGK2Q9HBY8 427 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 CHRAC1Q9NRG0 131 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 CHMP2BQ9UQN3 213 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 INVSQ9Y283 1065 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 TCAF1Q9Y4C2 921 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 KCTD3Q9Y597 815 aa14.44□□□□□ -0.1
LINC00339-208ENST00000634934 LRRC72A6NJI9 287 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 TDGF1P13385 188 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 ZNF30P17039 623 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 ELK3P41970 407 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 FNTBP49356 437 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 LIG3P49916 1009 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 LAMB3Q13751 1172 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 CDKN3Q16667 212 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 TMEM52BQ4KMG9 183 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 LIPIQ6XZB0 460 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 TTC30BQ8N4P2 665 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 FAM160A2Q8N612 972 aaPredicted RBP14.43□□□□□ -0.1
LINC00339-208ENST00000634934 STAMBPL1Q96FJ0 436 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 TOE1Q96GM8 510 aaKnown RBP14.43□□□□□ -0.1
LINC00339-208ENST00000634934 BPIFA1Q9NP55 256 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 FAM86C1Q9NVL1 165 aa14.43□□□□□ -0.1
LINC00339-208ENST00000634934 E7ESA3 106 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 STX7O15400 261 aaKnown RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 LDB2O43679 373 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 LZTS3O60299 673 aaPredicted RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 RNGTTO60942 597 aaKnown RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 SEMA4FO95754 770 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 IGLV3-19P01714 112 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 SP9P0CG40 484 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 LPOP22079 712 aaPredicted RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 CD6P30203 668 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 HOXA6P31267 233 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 TMPRSS15P98073 1019 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 PTSQ03393 145 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 IFFO1Q0D2I5 559 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 ITIH4Q14624 930 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms