RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 PCCBP05166 539 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 PTMAP06454 111 aaKnown RBP15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 CCDC175P0C221 793 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 JMJD7P0C870 316 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 MLLT3P42568 568 aaPredicted RBP15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 SRP54P61011 504 aaKnown RBP15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 KCNC4Q03721 635 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 IL10RBQ08334 325 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 ELP6Q0PNE2 266 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 CYTH1Q15438 398 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 TMEM52BQ4KMG9 183 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 CFAP58Q5T655 872 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 NCBP2-AS2Q69YL0 99 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 USP53Q70EK8 1073 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 SYCE1Q8N0S2 351 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 NSMCE1Q8WV22 266 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 RNF25Q96BH1 459 aaPredicted RBP15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 ZNF830Q96NB3 372 aaPredicted RBP15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 LRRN3Q9H3W5 708 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 CLMPQ9H6B4 373 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 PDFQ9HBH1 243 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 DKK3Q9UBP4 350 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 TRIM10Q9UDY6 481 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 KLQ9UEF7 1012 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 PISDQ9UG56 409 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 UNC13CQ8NB66 2214 aa15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 FLNBO75369 2602 aaKnown RBP15.61■□□□□ 0.09
SNRNP48-203ENST00000634363 A0A1W2PQM1 296 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 TMX2-CTNND1H3BSU7 103 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 APOL1O14791 398 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 PALMO75781 387 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 PRKCGP05129 697 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 CCZ1BP86790 482 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 CCZ1P86791 482 aaPredicted RBP15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 NFATC3Q12968 1075 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 RFTN1Q14699 578 aaPredicted RBP15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 NFATC4Q14934 902 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 PAFAH1B3Q15102 231 aaKnown RBP15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 UGP2Q16851 508 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 ARHGAP36Q6ZRI8 547 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 RFX6Q8HWS3 928 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 LRRC49Q8IUZ0 686 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 CCDC50Q8IVM0 306 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 TP53INP2Q8IXH6 220 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 KATNAL2Q8IYT4 538 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 PAF1Q8N7H5 531 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 RBM41Q96IZ5 413 aaKnown RBP15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 TMEM74Q96NL1 305 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 RNF157Q96PX1 679 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 ARHGAP9Q9BRR9 750 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 CINPQ9BW66 212 aaPredicted RBP15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 FAM117AQ9C073 453 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 SUV39H2Q9H5I1 410 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 PCDH12Q9NPG4 1184 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 LHX3Q9UBR4 397 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 ATXN7L1Q9ULK2 861 aaPredicted RBP15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 ATMQ13315 3056 aa15.6■□□□□ 0.09
SNRNP48-203ENST00000634363 LRP4O75096 1905 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 A0A0U1RQJ8 604 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 CCDC66A2RUB6 948 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 GRID2IPA4D2P6 1211 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 D6RAR5 112 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 ZFXP17010 805 aaPredicted RBP15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 MX2P20592 715 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 LIG3P49916 1009 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 SRSF6Q13247 344 aaKnown RBP15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 EIF3IQ13347 325 aaKnown RBP15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 GSE1Q14687 1217 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 TMCO4Q5TGY1 634 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 ERAP2Q6P179 960 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 PEX26Q7Z412 305 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 TAF8Q7Z7C8 310 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 BBS5Q8N3I7 341 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 PQLC3Q8N755 202 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 EXD3Q8N9H8 876 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 FAM46DQ8NEK8 389 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 ATL2Q8NHH9 583 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 WDR92Q96MX6 357 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 ZNF599Q96NL3 588 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 MOSPD1Q9UJG1 213 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 AMFRQ9UKV5 643 aa15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 HEMK1Q9Y5R4 338 aaPredicted RBP15.59■□□□□ 0.09
SNRNP48-203ENST00000634363 C3orf70A6NLC5 250 aaPredicted RBP15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 NOBOXO60393 691 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 ZRANB2O95218 330 aaKnown RBP eCLIP15.58■□□□□ 0.083e-7■■■■□ 25.7
SNRNP48-203ENST00000634363 ITIH1P19827 911 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 CTNNA1P35221 906 aaKnown RBP15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 GARSP41250 739 aaKnown RBP15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 MARCKSL1P49006 195 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 SUOXP51687 545 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 DYNLT1P63172 113 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 GALNT2Q10471 571 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 TFDP2Q14188 446 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 ZNF235Q14590 738 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 LBRQ14739 615 aaKnown RBP15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 KCTD16Q68DU8 428 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 TIGD7Q6NT04 549 aaPredicted RBP15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 MFSD7Q6UXD7 560 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 SPOCD1Q6ZMY3 1216 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 CAMK1DQ8IU85 385 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms