RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 CYP46A1Q9Y6A2 500 aa3.28□□□□□ -1.88
SRP54-214ENST00000630962 TCF20Q9UGU0 1960 aaKnown RBP3.28□□□□□ -1.88
SRP54-214ENST00000630962 RRN3P2A6NIE6 340 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 EIF3CLB5ME19 914 aaKnown RBP3.27□□□□□ -1.89
SRP54-214ENST00000630962 GRID2O43424 1007 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 LMX1BO60663 402 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 SOCS5O75159 536 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 ZNF23P17027 643 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 KCNA5P22460 613 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 BDKRB2P30411 391 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 HOXC9P31274 260 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 CTCFP49711 727 aaPredicted RBP3.27□□□□□ -1.89
SRP54-214ENST00000630962 MMP14P50281 582 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 KRTAP10-6P60371 365 aaPredicted RBP3.27□□□□□ -1.89
SRP54-214ENST00000630962 CSNK2A1P68400 391 aaPredicted RBP3.27□□□□□ -1.89
SRP54-214ENST00000630962 SORDQ00796 357 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 GRIK2Q13002 908 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 OLIG2Q13516 323 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 NAE1Q13564 534 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 DRAP1Q14919 205 aaPredicted RBP3.27□□□□□ -1.89
SRP54-214ENST00000630962 MYLK3Q32MK0 819 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 TMEM95Q3KNT9 176 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 SLC45A4Q5BKX6 768 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 STPG1Q5TH74 334 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 TTI2Q6NXR4 508 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 NFE4Q86UQ8 179 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 NOXA1Q86UR1 476 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 DHX40Q8IX18 779 aaKnown RBP3.27□□□□□ -1.89
SRP54-214ENST00000630962 SMC5Q8IY18 1101 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 SLC35F3Q8IY50 421 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 ZNF441Q8N8Z8 693 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 CSNK2A3Q8NEV1 391 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 DMBX1Q8NFW5 382 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 THAP6Q8TBB0 222 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 WBP2Q969T9 261 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 ZBTB10Q96DT7 871 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 RNF125Q96EQ8 232 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 TMEM68Q96MH6 324 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 QRFPRQ96P65 431 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 CSF3RQ99062 836 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 TMEM47Q9BQJ4 181 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 SIL1Q9H173 461 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 PPP1R3EQ9H7J1 279 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 JMJD4Q9H9V9 463 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 DDX4Q9NQI0 724 aaKnown RBP3.27□□□□□ -1.89
SRP54-214ENST00000630962 KLHL1Q9NR64 748 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 RRN3Q9NYV6 651 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 TAS2R10Q9NYW0 307 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 PDP2Q9P2J9 529 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 ERRFI1Q9UJM3 462 aaPredicted RBP3.27□□□□□ -1.89
SRP54-214ENST00000630962 SARDHQ9UL12 918 aa3.27□□□□□ -1.89
SRP54-214ENST00000630962 A0A1W2PRG0 241 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 ZNF587BE7ETH6 402 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 P2RY10O00398 339 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 SPINT2O43291 252 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 SEC14L2O76054 403 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 F9P00740 461 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 AFPP02771 609 aaKnown RBP3.26□□□□□ -1.89
SRP54-214ENST00000630962 POLBP06746 335 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 CD53P19397 219 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 S1PR1P21453 382 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 CNTFP26441 200 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 CDKN1AP38936 164 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 FMO5P49326 533 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 ZBED6P86452 979 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 ARL16Q0P5N6 197 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 GALNT2Q10471 571 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 DCTN2Q13561 401 aaKnown RBP3.26□□□□□ -1.89
SRP54-214ENST00000630962 CCNG2Q16589 344 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 SLC9B1Q4ZJI4 515 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 DCST1Q5T197 706 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 PDSS1Q5T2R2 415 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 FAM69AQ5T7M9 428 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 ZNF704Q6ZNC4 412 aaPredicted RBP3.26□□□□□ -1.89
SRP54-214ENST00000630962 USP43Q70EL4 1123 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 ZNF771Q7L3S4 317 aaPredicted RBP3.26□□□□□ -1.89
SRP54-214ENST00000630962 TDRPQ86YL5 185 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 SPATA20Q8TB22 786 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 ST8SIA4Q92187 359 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 SMARCE1Q969G3 411 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 FAM149B1Q96BN6 582 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 NEURL2Q9BR09 285 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 ZNF334Q9HCZ1 680 aaPredicted RBP3.26□□□□□ -1.89
SRP54-214ENST00000630962 MDFICQ9P1T7 246 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 CTNNAL1Q9UBT7 734 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 PGAP2Q9UHJ9 254 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 TINAGQ9UJW2 476 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 PADI1Q9ULC6 663 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 CEPT1Q9Y6K0 416 aa3.26□□□□□ -1.89
SRP54-214ENST00000630962 A0A1W2PQM1 296 aa3.25□□□□□ -1.89
SRP54-214ENST00000630962 WDR1O75083 606 aa3.25□□□□□ -1.89
SRP54-214ENST00000630962 G6PDP11413 515 aa3.25□□□□□ -1.89
SRP54-214ENST00000630962 CDH1P12830 882 aa3.25□□□□□ -1.89
SRP54-214ENST00000630962 ZNF182P17025 639 aaPredicted RBP3.25□□□□□ -1.89
SRP54-214ENST00000630962 TCEA1P23193 301 aaKnown RBP3.25□□□□□ -1.89
SRP54-214ENST00000630962 DMP1Q13316 513 aaPredicted RBP3.25□□□□□ -1.89
SRP54-214ENST00000630962 TDGQ13569 410 aa3.25□□□□□ -1.89
SRP54-214ENST00000630962 TMEM35AQ53FP2 167 aa3.25□□□□□ -1.89
SRP54-214ENST00000630962 ANKRD54Q6NXT1 300 aa3.25□□□□□ -1.89
SRP54-214ENST00000630962 PLEKHM3Q6ZWE6 761 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms