RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 ACAD10Q6JQN1 1059 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 KCTD18Q6PI47 426 aaPredicted RBP2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 MEX3BQ6ZN04 569 aaKnown RBP2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 KRBA2Q6ZNG9 492 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 C9orf139Q6ZV77 190 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 TUBA1AQ71U36 451 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 SMIM29Q86T20 159 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 SFR1Q86XK3 245 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 ARMC8Q8IUR7 673 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 ZNF34Q8IZ26 560 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 MUC20Q8N307 709 aaPredicted RBP2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 CIARTQ8N365 385 aaPredicted RBP2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 PCDH20Q8N6Y1 951 aaKnown RBP2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 METTL6Q8TCB7 284 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 KCNG4Q8TDN1 519 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 CD101Q93033 1021 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 GRAMD2BQ96HH9 432 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 SLC41A2Q96JW4 573 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 INPP4AQ96PE3 977 aaPredicted RBP2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 CMKLR1Q99788 373 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 FAM110AQ9BQ89 295 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 TUBA1CQ9BQE3 449 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 IFIH1Q9BYX4 1025 aaKnown RBP2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 EVA1AQ9H8M9 152 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 UBTD1Q9HAC8 227 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 BRF2Q9HAW0 419 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 SEBOXQ9HB31 216 aaPredicted RBP2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 SCPEP1Q9HB40 452 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 SDF2L1Q9HCN8 221 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 TXLNGQ9NUQ3 528 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 SLC13A4Q9UKG4 626 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 PADI3Q9ULW8 664 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 GTF2A1LQ9UNN4 478 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 ERVK-11Q9UQG0 969 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 CEPT1Q9Y6K0 416 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 KDM3AQ9Y4C1 1321 aa2.4□□□□□ -2.03
SCARNA4-201ENST00000629045 LRRC53A6NM62 1247 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 BMPR1BO00238 502 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 LINC01565O15544 149 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 LMX1BO60663 402 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 TIPRLO75663 272 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 NKX2-2O95096 273 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 EGFP01133 1207 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 IGLV2-11P01706 119 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 CDH1P12830 882 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 KRT10P13645 584 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 MYOD1P15172 320 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 S1PR1P21453 382 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 KCNA5P22460 613 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 CORO1AP31146 461 aaKnown RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 PBX3P40426 434 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 PIP4K2AP48426 406 aaPredicted RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 ZNF132P52740 706 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 RARSP54136 660 aaKnown RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 F2RL1P55085 397 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 EIF3BP55884 814 aaKnown RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 ISL1P61371 349 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 CEBPZQ03701 1054 aaKnown RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 ACSM2AQ08AH3 577 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 HYAL1Q12794 435 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 DRAP1Q14919 205 aaPredicted RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 CCDC96Q2M329 555 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 KRTAP24-1Q3LI83 254 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 KCNT1Q5JUK3 1230 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 C9orf50Q5SZB4 431 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 STPG1Q5TH74 334 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 GGNBP1Q5YKI7 109 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 DUS1LQ6P1R4 473 aaKnown RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 TSSK4Q6SA08 328 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 GFRALQ6UXV0 394 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 RAD9BQ6WBX8 426 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 R3HCC1LQ7Z5L2 792 aaKnown RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 TMEM219Q86XT9 240 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 WDR63Q8IWG1 891 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 ACVR1CQ8NER5 493 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 PSPC1Q8WXF1 523 aaKnown RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 RHBDF1Q96CC6 855 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 ORAI1Q96D31 301 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 SAAL1Q96ER3 474 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 PPP1R13BQ96KQ4 1090 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 TTC14Q96N46 770 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 TMEM47Q9BQJ4 181 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 ABI3Q9P2A4 366 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 RALYQ9UKM9 306 aaKnown RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 TTC7AQ9ULT0 858 aaPredicted RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 ZNF711Q9Y462 761 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 LOXL2Q9Y4K0 774 aa2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 PDS5AQ29RF7 1337 aaKnown RBP2.39□□□□□ -2.03
SCARNA4-201ENST00000629045 GREB1LQ9C091 1923 aaPredicted RBP2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 A0A1B0GVC2 190 aa2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 CCDC189A1A4V9 331 aa2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 TTC36A6NLP5 189 aa2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 KRT36O76013 467 aa2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 PLGP00747 810 aaPredicted RBP2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 HOXB5P09067 269 aa2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 UBL4AP11441 157 aa2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 CCR9P51686 369 aa2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 ECT2LQ008S8 904 aa2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 POU3F1Q03052 451 aaPredicted RBP2.38□□□□□ -2.03
SCARNA4-201ENST00000629045 TMEM115Q12893 351 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms