RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SNAP91O60641 907 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 MFN2O95140 757 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 C4BPAP04003 597 aaKnown RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 EIF2B2P49770 351 aaKnown RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 DEF8Q6ZN54 512 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 PTF1AQ7RTS3 328 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 KBTBD2Q8IY47 623 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 OR4K2Q8NGD2 314 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 HEXDCQ8WVB3 486 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 EPB41L1Q9H4G0 881 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 PTGFRNQ9P2B2 879 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 ATRNO75882 1429 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 DDX3YO15523 660 aaKnown RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 MFSD11O43934 449 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 CST3P01034 146 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 BPGMP07738 259 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 CORO1AP31146 461 aaKnown RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 SLC24A5Q71RS6 500 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TIFAQ96CG3 184 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 ZNF607Q96SK3 696 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 TTLL2Q9BWV7 592 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 RCOR3Q9P2K3 495 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-209ENST00000627620 ERGIC3Q9Y282 383 aa12.81□□□□□ -0.36
SCN8A-209ENST00000627620 GLYATL1P3A0A0U1RQE8 302 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 TREHO43280 583 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 C1RP00736 705 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 DLG2Q15700 870 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 ANKRD23Q86SG2 305 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 ADGRG2Q8IZP9 1017 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 EXO5Q9H790 373 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 STON1Q9Y6Q2 735 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SLC28A2O43868 658 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 FGF19O95750 216 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 LAG3P18627 525 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 ITPKAP23677 461 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 KCTD21Q4G0X4 260 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 TIGD2Q4W5G0 525 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 MPPE1Q53F39 396 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 RNASEH2BQ5TBB1 312 aaKnown RBP12.8□□□□□ -0.36
SCN8A-209ENST00000627620 HECTD2Q5U5R9 776 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 DENND6AQ8IWF6 608 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 RACGAP1Q9H0H5 632 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 EGFL7Q9UHF1 273 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 PADI3Q9ULW8 664 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SUV39H1O43463 412 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SELPP16109 830 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SLC6A2P23975 617 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SLC5A3P53794 718 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 NAIF1Q69YI7 327 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-209ENST00000627620 B3GNT6Q6ZMB0 384 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 CHSY3Q70JA7 882 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 TRMOQ9BU70 441 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 PDZD7Q9H5P4 517 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 R3HDM2Q9Y2K5 976 aaKnown RBP12.8□□□□□ -0.36
SCN8A-209ENST00000627620 E9PAM4 449 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 EDF1O60869 148 aaKnown RBP12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SNHG28P0DPA3 235 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 TPSB2P20231 275 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SLC7A2P52569 658 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SRP54P61011 504 aaKnown RBP12.8□□□□□ -0.36
SCN8A-209ENST00000627620 CYP4F2P78329 520 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 CYP4F3Q08477 520 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 TPSAB1Q15661 275 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 PLA2G4EQ3MJ16 856 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 CRY2Q49AN0 593 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 ZDHHC20Q5W0Z9 365 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 CAPN13Q6MZZ7 669 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-209ENST00000627620 ANKS1BQ7Z6G8 1248 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SFRP1Q8N474 314 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 C12orf50Q8NA57 414 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-209ENST00000627620 TCF12Q99081 682 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 KLHL31Q9H511 634 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SGK2Q9HBY8 427 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 OGDHLQ9ULD0 1010 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 PRMT5O14744 637 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-209ENST00000627620 KLHL18O94889 574 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 C2P06681 752 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 ITGADQ13349 1161 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 C17orf64Q86WR6 236 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 PROSER1Q86XN7 944 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 RASGEF1CQ8N431 466 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 SLC47A1Q96FL8 570 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 NPAS2Q99743 824 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 LMAN2LQ9H0V9 348 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 CRISPLD1Q9H336 500 aa12.8□□□□□ -0.36
SCN8A-209ENST00000627620 C5orf60A6NFR6 353 aa12.79□□□□□ -0.36
SCN8A-209ENST00000627620 BTBD19C9JJ37 291 aa12.79□□□□□ -0.36
SCN8A-209ENST00000627620 MAPKAPK2P49137 400 aa12.79□□□□□ -0.36
SCN8A-209ENST00000627620 MANFP55145 182 aaKnown RBP12.79□□□□□ -0.36
SCN8A-209ENST00000627620 LSM3P62310 102 aaKnown RBP12.79□□□□□ -0.36
SCN8A-209ENST00000627620 ZNF697Q5TEC3 545 aa12.79□□□□□ -0.36
SCN8A-209ENST00000627620 CRNNQ9UBG3 495 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-209ENST00000627620 EFR3BQ9Y2G0 817 aa12.79□□□□□ -0.36
SCN8A-209ENST00000627620 MRPS7Q9Y2R9 242 aaKnown RBP12.79□□□□□ -0.36
SCN8A-209ENST00000627620 RAI2Q9Y5P3 530 aa12.79□□□□□ -0.36
SCN8A-209ENST00000627620 RNF225M0QZC1 329 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-209ENST00000627620 MGRN1O60291 552 aa12.79□□□□□ -0.36
SCN8A-209ENST00000627620 UGT2B4P06133 528 aa12.79□□□□□ -0.36
SCN8A-209ENST00000627620 PPIBP23284 216 aaKnown RBP12.79□□□□□ -0.36
SCN8A-209ENST00000627620 TPP2P29144 1249 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms