RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 ZDHHC20Q5W0Z9 365 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 SERPINA13PQ6UXR4 307 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 LYSMD3Q7Z3D4 306 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CCDC91Q7Z6B0 441 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 PTAR1Q7Z6K3 402 aaPredicted RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 DSG4Q86SJ6 1040 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 LCA5Q86VQ0 697 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 DENND6AQ8IWF6 608 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CBARPQ8N350 705 aaPredicted RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CHST14Q8NCH0 376 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TMIEQ8NEW7 156 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TTC8Q8TAM2 541 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 GRIN3AQ8TCU5 1115 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 MGARPQ8TDB4 240 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 DENND1AQ8TEH3 1009 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 OR8D1Q8WZ84 308 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TSPAN17Q96FV3 270 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 KLHL32Q96NJ5 620 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TTC1Q99614 292 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 RPP25Q9BUL9 199 aaKnown RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TMEM245Q9H330 911 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 CCDC134Q9H6E4 229 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 UBE2ZQ9H832 354 aaPredicted RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 SNX15Q9NRS6 342 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 RAD18Q9NS91 495 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 PCMTD2Q9NV79 361 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 INTS10Q9NVR2 710 aaKnown RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 POLR3BQ9NW08 1133 aaPredicted RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 IL17CQ9P0M4 197 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 THAP10Q9P2Z0 257 aaPredicted RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 DCDC2Q9UHG0 476 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 APPL1Q9UKG1 709 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TLK1Q9UKI8 766 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 ANKRD6Q9Y2G4 727 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 MTO1Q9Y2Z2 717 aaKnown RBP7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 WASF2Q9Y6W5 498 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 TRANK1O15050 2925 aa7.54□□□□□ -1.2
PTP4A1-206ENST00000627002 C2orf16Q68DN1 1984 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 A0A087X1B8 175 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 FAM95CA0A1B0GW59 222 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 GRXCR2A6NFK2 248 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 OR51F1A6NGY5 319 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 UPK3BL1B0FP48 263 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 C2CD4DB7Z1M9 353 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 UPK3BL2E5RIL1 263 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 MBTPS2O43462 519 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 GLRA3O75311 464 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 HAUS5O94927 633 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 CLDN7O95471 211 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 S1PR4O95977 384 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 ALDOAP04075 364 aaKnown RBP7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 COL6A2P12110 1019 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 KCNA5P22460 613 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 GABRB3P28472 473 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 VIPR1P32241 457 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 MC4RP32245 332 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 FOXN2P32314 431 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 CRHR1P34998 444 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 RPA3P35244 121 aaPredicted RBP7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 SPAM1P38567 509 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 TTPAP49638 278 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 SUOXP51687 545 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 STC1P52823 247 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 SLC12A2P55011 1212 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 MPP1Q00013 466 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 CACNG1Q06432 222 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 MESP2Q0VG99 397 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 MPP2Q14168 576 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 USP10Q14694 798 aaKnown RBP7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 CDKN3Q16667 212 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 TYSND1Q2T9J0 566 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 TAF1BQ53T94 588 aaPredicted RBP7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 ZRANB3Q5FWF4 1079 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 C9orf64Q5T6V5 341 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 HHATQ5VTY9 493 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 LYPLAL1Q5VWZ2 237 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 TTC19Q6DKK2 380 aaPredicted RBP7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 FAM45BPQ6NSW5 357 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 ERAP2Q6P179 960 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 CRTC1Q6UUV9 634 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 KYAT3Q6YP21 454 aaKnown RBP7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 CERS6Q6ZMG9 384 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 TAX1BP1Q86VP1 789 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 ZSWIM9Q86XI8 627 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 STK40Q8N2I9 435 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 FAM45AQ8TCE6 357 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 KCNV2Q8TDN2 545 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 TCP10LQ8TDR4 215 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 CKAP2Q8WWK9 683 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 DNASE1L2Q92874 299 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 VOPP1Q96AW1 172 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 ATXN7L3BQ96GX2 97 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 MSANTD3Q96H12 275 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 PPP1R16AQ96I34 528 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 ELMO2Q96JJ3 720 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 TSNARE1Q96NA8 513 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 KLF6Q99612 283 aaPredicted RBP7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 P2RY13Q9BPV8 354 aa7.53□□□□□ -1.2
PTP4A1-206ENST00000627002 PHF7Q9BWX1 381 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms