RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SCAMP3O14828 347 aaKnown RBP19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 EFCAB14O75071 495 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 PIK3R1P27986 724 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 CDC25CP30307 473 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 PPM1AP35813 382 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 PPARGP37231 505 aaPredicted RBP19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 PLK1P53350 603 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 TRAF2Q12933 501 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 RIPOR1Q6ZS17 1223 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 KCNV2Q8TDN2 545 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 ACTRT2Q8TDY3 377 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 LPGAT1Q92604 370 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 L3HYPDHQ96EM0 354 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 ANKRD27Q96NW4 1050 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 PANX3Q96QZ0 392 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 TRMOQ9BU70 441 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 GTSE1Q9NYZ3 720 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 VPS28Q9UK41 221 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 ARHGAP26Q9UNA1 814 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 ASB3Q9Y575 518 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 MKI67P46013 3256 aaKnown RBP19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 THRAP10827 490 aa19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 PTDSS1P48651 473 aaKnown RBP19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 ACTR3P61158 418 aa19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 SATB1Q01826 763 aa19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 CREMQ03060 361 aa19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 RALGPS1Q5JS13 557 aa19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 ALG14Q96F25 216 aa19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 SMIM14Q96QK8 99 aa19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 ZBED2Q9BTP6 218 aa19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 GSTO2Q9H4Y5 243 aa19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 POLR3BQ9NW08 1133 aaPredicted RBP19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 DNMT3BQ9UBC3 853 aaKnown RBP19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 STOML1Q9UBI4 398 aa19.69■□□□□ 0.74
PCDHB11-202ENST00000624887 RGSL1A5PLK6 1076 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 SPATA31D3P0C874 917 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 CHRM1P11229 460 aaPredicted RBP19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 RAG1P15918 1043 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 ITGAXP20702 1163 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 GCKP35557 465 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 BTKQ06187 659 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 PDAP1Q13442 181 aaKnown RBP19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 CUL3Q13618 768 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 CDH18Q13634 790 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 ZNF678Q5SXM1 525 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 TLDC1Q6P9B6 456 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 SPATA31D4Q6ZUB0 917 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 CUZD1Q86UP6 607 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 AFAP1L2Q8N4X5 818 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 RHEBL1Q8TAI7 183 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 YME1L1Q96TA2 773 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 STX18Q9P2W9 335 aaKnown RBP19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 VPS51Q9UID3 782 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 KIAA1671Q9BY89 1806 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 UBA6A0AVT1 1052 aaPredicted RBP19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 SDHDO14521 159 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 CCNT2O60583 730 aaKnown RBP19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 SMIM24O75264 130 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 CSKP41240 450 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 C1orf146Q5VVC0 180 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 NXNQ6DKJ4 435 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 PGM2L1Q6PCE3 622 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 DCAF4L2Q8NA75 395 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 WFDC5Q8TCV5 224 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 TAS2R13Q9NYV9 303 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 HACD3Q9P035 362 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 STK39Q9UEW8 545 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 VPS9D1Q9Y2B5 631 aa19.68■□□□□ 0.74
PCDHB11-202ENST00000624887 GBF1Q92538 1859 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 FZD6O60353 706 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 NDUFS3O75489 264 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 GABRR2P28476 465 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 ABL2P42684 1182 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 RHOAP61586 193 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 PEX6Q13608 980 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 CCDC6Q16204 474 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 TMEM198Q66K66 360 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 RPS27LQ71UM5 84 aaKnown RBP19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 GAREM2Q75VX8 874 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 KIRREL3Q8IZU9 778 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 TTC30BQ8N4P2 665 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 TMEM199Q8N511 208 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 CEP70Q8NHQ1 597 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 RP9Q8TA86 221 aaKnown RBP19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 ZBP1Q9H171 429 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 CCDC68Q9H2F9 335 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 TFB2MQ9H5Q4 396 aaKnown RBP19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 SYTL2Q9HCH5 934 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 TNFRSF12AQ9NP84 129 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 MED16Q9Y2X0 877 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 DENND4CQ5VZ89 1909 aa19.67■□□□□ 0.74
PCDHB11-202ENST00000624887 TGM5O43548 720 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 TBX10O75333 385 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 RHOBTB1O94844 696 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 CNPP09543 421 aaKnown RBP19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 FMO4P31512 558 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 HERVK_113P63132 956 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 SLC34A1Q06495 639 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 SETMARQ53H47 684 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms