RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 CDKN2AIPNLQ96HQ2 116 aa18.48■□□□□ 0.55
PCDHB2-202ENST00000622947 VCX3BQ9H321 246 aa18.48■□□□□ 0.55
PCDHB2-202ENST00000622947 VCX3AQ9NNX9 186 aa18.48■□□□□ 0.55
PCDHB2-202ENST00000622947 BLOC1S6Q9UL45 172 aa18.48■□□□□ 0.55
PCDHB2-202ENST00000622947 TK2O00142 265 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 RPP40O75818 363 aaKnown RBP18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 GM2AP17900 193 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 DDX6P26196 483 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 ZNF77Q15935 545 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 DGKKQ5KSL6 1271 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 GLT6D1Q7Z4J2 308 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 LCA5Q86VQ0 697 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 CAMK1DQ8IU85 385 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 C12orf76Q8N812 135 aaPredicted RBP18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 OR6Y1Q8NGX8 325 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 ZNF398Q8TD17 642 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 ACDQ96AP0 544 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 C7orf26Q96N11 449 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 LRRC3BQ96PB8 259 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 MYLK2Q9H1R3 596 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 NMRAL1Q9HBL8 299 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 NLE1Q9NVX2 485 aaPredicted RBP18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 MYO9BQ13459 2157 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 C2orf16Q68DN1 1984 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 SLC4A1P02730 911 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 HNRNPA1P09651 372 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 TROVE2P10155 538 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 CPA3P15088 417 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 STMN1P16949 149 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 GLRBP48167 497 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 STX3Q13277 289 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 GPM6BQ13491 265 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 CCDC153Q494R4 210 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 FUT11Q495W5 492 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 ITFG1Q8TB96 612 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 NXNL1Q96CM4 212 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 EID2BQ96D98 161 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 MOCOSQ96EN8 888 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 TNKS2Q9H2K2 1166 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 EVLQ9UI08 416 aaPredicted RBP18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 TLK1Q9UKI8 766 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 RIMKLBQ9ULI2 386 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 TMCO1Q9UM00 188 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 CRYL1Q9Y2S2 319 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 PCDHB9Q9Y5E1 797 aa18.47■□□□□ 0.55
PCDHB2-202ENST00000622947 CD3EAPO15446 510 aaKnown RBP18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 TGDSO95455 350 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 FGF19O95750 216 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 VHLP40337 213 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 SLC12A1Q13621 1099 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 TAF1AQ15573 450 aaPredicted RBP18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 PITRM1Q5JRX3 1037 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 ATG16L1Q676U5 607 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 RETSATQ6NUM9 610 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 ZNF549Q6P9A3 640 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 NAPRTQ6XQN6 538 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 GALNT7Q86SF2 657 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 ARID3BQ8IVW6 561 aaPredicted RBP18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 TRIM42Q8IWZ5 723 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 HOMEZQ8IX15 550 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 RAB3IL1Q8TBN0 382 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 MMADHCQ9H3L0 296 aaPredicted RBP18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 DCLRE1BQ9H816 532 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 PDP2Q9P2J9 529 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 STOML1Q9UBI4 398 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 RUVBL2Q9Y230 463 aaKnown RBP18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 A0A0G2JND7 137 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 TARM1B6A8C7 271 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 NEDD8-MDP1E9PL57 170 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 TRIM24O15164 1050 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 PIGNO95427 931 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 PSMA3P25788 255 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 GSTT1P30711 240 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 POLD2P49005 469 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 CDKN1CP49918 316 aaPredicted RBP18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 PLK1P53350 603 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 CDKN2DP55273 166 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 ERVK-21P61565 698 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 TIAL1Q01085 375 aaKnown RBP eCLIP18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 ITGA9Q13797 1035 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 ARHGAP15Q53QZ3 475 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 EFHBQ8N7U6 833 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 OR4L1Q8NH43 312 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 MYLIPQ8WY64 445 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 GBP5Q96PP8 586 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 TRIM55Q9BYV6 548 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 NMRK1Q9NWW6 199 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 MARCOQ9UEW3 520 aaPredicted RBP18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 ACOT9Q9Y305 439 aa18.46■□□□□ 0.55
PCDHB2-202ENST00000622947 SPTBN5Q9NRC6 3674 aaKnown RBP18.45■□□□□ 0.54
PCDHB2-202ENST00000622947 MAGEA13PA6NCF6 341 aa18.45■□□□□ 0.54
PCDHB2-202ENST00000622947 TRAFD1O14545 582 aaPredicted RBP18.45■□□□□ 0.54
PCDHB2-202ENST00000622947 XYLBO75191 536 aa18.45■□□□□ 0.54
PCDHB2-202ENST00000622947 CRTAMO95727 393 aa18.45■□□□□ 0.54
PCDHB2-202ENST00000622947 GLP2RO95838 553 aa18.45■□□□□ 0.54
PCDHB2-202ENST00000622947 POU4F1Q01851 419 aa18.45■□□□□ 0.54
PCDHB2-202ENST00000622947 TMEM207Q6UWW9 146 aa18.45■□□□□ 0.54
PCDHB2-202ENST00000622947 FSTL5Q8N475 847 aaPredicted RBP18.45■□□□□ 0.54
PCDHB2-202ENST00000622947 TTC30BQ8N4P2 665 aa18.45■□□□□ 0.54
PCDHB2-202ENST00000622947 GPR150Q8NGU9 434 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms