RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 FUBP1Q96AE4 644 aaKnown RBP13.96□□□□□ -0.17
PCDHGC3-208ENST00000622836 AP2M1Q96CW1 435 aa13.96□□□□□ -0.17
PCDHGC3-208ENST00000622836 WDR92Q96MX6 357 aa13.96□□□□□ -0.17
PCDHGC3-208ENST00000622836 LYSMD1Q96S90 227 aa13.96□□□□□ -0.17
PCDHGC3-208ENST00000622836 FSD1LQ9BXM9 530 aa13.96□□□□□ -0.17
PCDHGC3-208ENST00000622836 CAAP1Q9H8G2 361 aa13.96□□□□□ -0.17
PCDHGC3-208ENST00000622836 PHPT1Q9NRX4 125 aaPredicted RBP13.96□□□□□ -0.17
PCDHGC3-208ENST00000622836 KLF15Q9UIH9 416 aa13.96□□□□□ -0.17
PCDHGC3-208ENST00000622836 DOLKQ9UPQ8 538 aa13.96□□□□□ -0.17
PCDHGC3-208ENST00000622836 K7ESM1 405 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 SCAMP1O15126 338 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 SIGLEC6O43699 453 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 NDST3O95803 873 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 TNFP01375 233 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 C1SP09871 688 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 PIRTP0C851 137 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 STC1P52823 247 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 WNT3AP56704 352 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 KIAA1024LP59773 190 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 SRP54P61011 504 aaKnown RBP13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 C1orf61Q13536 156 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 PRPSAP1Q14558 356 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 TCEA2Q15560 299 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 MEI1Q5TIA1 1274 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 KANSL1Q7Z3B3 1105 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 HEATR4Q86WZ0 1026 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 IPMKQ8NFU5 416 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 OR56A4Q8NGH8 313 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 OR4C6Q8NH72 309 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 FCRL5Q96RD9 977 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 TRIB3Q96RU7 358 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 DUSP23Q9BVJ7 150 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 GPR63Q9BZJ6 419 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 TCEAL2Q9H3H9 227 aaPredicted RBP13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 SUDS3Q9H7L9 328 aaPredicted RBP13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 ZFYVE1Q9HBF4 777 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 NLGN3Q9NZ94 848 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 PKD2L2Q9NZM6 624 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 ANGPTL2Q9UKU9 493 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 SHOC2Q9UQ13 582 aa13.95□□□□□ -0.18
PCDHGC3-208ENST00000622836 TRIM38O00635 465 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 HYAL3O43820 417 aaPredicted RBP13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 ANXA9O76027 345 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 ANXA6P08133 673 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 MYCLP1P12525 358 aaPredicted RBP13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 PMLP29590 882 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 TRIM23P36406 574 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 HK3P52790 923 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 GEMP55040 296 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 DNAJC3Q13217 504 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 MPP3Q13368 585 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 ELOCQ15369 112 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 ALG11Q2TAA5 492 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 DEFB133Q30KQ1 61 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 ANKRD20A2Q5SQ80 823 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 ANKRD20A1Q5TYW2 823 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 ANKRD20A3Q5VUR7 823 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 RFLNAQ6ZTI6 216 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 LYSMD3Q7Z3D4 306 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 TECPR1Q7Z6L1 1165 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 SLCO6A1Q86UG4 719 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 NRSN1Q8IZ57 195 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 PELI3Q8N2H9 469 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 CBARPQ8N350 705 aaPredicted RBP13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 CHCHD4Q8N4Q1 142 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 SLC25A41Q8N5S1 370 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 SCAMP4Q969E2 229 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 TADA1Q96BN2 335 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 SRPK1Q96SB4 655 aaKnown RBP13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 LRRC61Q9BV99 259 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 LGR4Q9BXB1 951 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 ABCG8Q9H221 673 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 GBA3Q9H227 469 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 EVA1BQ9NVM1 165 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 ZNF711Q9Y462 761 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 CSNK1G3Q9Y6M4 447 aa13.94□□□□□ -0.18
PCDHGC3-208ENST00000622836 TCRBV7S2A1N4TA0A589 114 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 TMEM202A6NGA9 273 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 PYGLP06737 847 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 HOXC4P09017 264 aaPredicted RBP13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 CKMT2P17540 419 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 SPINK2P20155 84 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 CDK3Q00526 305 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 DPTQ07507 201 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 KLF1Q13351 362 aaPredicted RBP13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 DOK6Q6PKX4 331 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 KDELC1Q6UW63 502 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 ARHGEF18Q6ZSZ5 1173 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 ZNF765Q7L2R6 523 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 FSTL5Q8N475 847 aaPredicted RBP13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 FAM71DQ8N9W8 422 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 CCDC110Q8TBZ0 833 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 SCG3Q8WXD2 468 aaKnown RBP13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 LRRC45Q96CN5 670 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 PDXPQ96GD0 296 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 OXNAD1Q96HP4 312 aaPredicted RBP13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 SPATA13Q96N96 652 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 RIOK2Q9BVS4 552 aaKnown RBP13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 TEX101Q9BY14 249 aa13.93□□□□□ -0.18
PCDHGC3-208ENST00000622836 CARD9Q9H257 536 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms