RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 TSC22D2O75157 780 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 CATP04040 527 aaKnown RBP16.14■□□□□ 0.17
GABRB3-215ENST00000622697 ELNP15502 786 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 EPORP19235 508 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 TAS2R39P59534 338 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 BLMHQ13867 455 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 PRKD1Q15139 912 aaPredicted RBP16.14■□□□□ 0.17
GABRB3-215ENST00000622697 BBS4Q96RK4 519 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 RBPJLQ9UBG7 517 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 KLHL3Q9UH77 587 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 GSNP06396 782 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 SLC25A11Q02978 314 aaKnown RBP16.14■□□□□ 0.17
GABRB3-215ENST00000622697 PSMG2Q969U7 264 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 TADA1Q96BN2 335 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 PRKAG3Q9UGI9 489 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 FBXW11Q9UKB1 542 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 POMPQ9Y244 141 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 FAM25AB3EWG3 89 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 FAM25CB3EWG5 89 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 FAM25GB3EWG6 89 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 KPNA4O00629 521 aaPredicted RBP16.14■□□□□ 0.17
GABRB3-215ENST00000622697 DPYSL2Q16555 572 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 CEP78Q5JTW2 689 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 TXNDC11Q6PKC3 985 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 OR7D4Q8NG98 312 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 OR7A2PQ8NGA2 310 aa16.14■□□□□ 0.17
GABRB3-215ENST00000622697 DNAJC1Q96KC8 554 aaKnown RBP16.14■□□□□ 0.17
GABRB3-215ENST00000622697 ALDH1A2O94788 518 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 CCNHP51946 323 aaPredicted RBP16.13■□□□□ 0.17
GABRB3-215ENST00000622697 RSBN1Q5VWQ0 802 aaPredicted RBP16.13■□□□□ 0.17
GABRB3-215ENST00000622697 OFCC1Q8IZS5 231 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 PGAM4Q8N0Y7 254 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 RNF39Q9H2S5 420 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 STK39Q9UEW8 545 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 SNAP91O60641 907 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 CNPP09543 421 aaKnown RBP16.13■□□□□ 0.17
GABRB3-215ENST00000622697 COL6A2P12110 1019 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 FLT3LGP49771 235 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 NCBP2-AS2Q69YL0 99 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 CTU1Q7Z7A3 348 aaKnown RBP16.13■□□□□ 0.17
GABRB3-215ENST00000622697 SFRP1Q8N474 314 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 PNPT1Q8TCS8 783 aaKnown RBP16.13■□□□□ 0.17
GABRB3-215ENST00000622697 SLC39A8Q9C0K1 460 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 TBC1D30Q9Y2I9 924 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 MYH8P13535 1937 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 IQCF5A8MTL0 148 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 GPR180Q86V85 440 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 PROX1Q92786 737 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 RNF208Q9H0X6 261 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 UBXN8O00124 270 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 MATN3O15232 486 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 ITPKAP23677 461 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 CPSF7Q8N684 471 aaKnown RBP16.13■□□□□ 0.17
GABRB3-215ENST00000622697 TSEN34Q9BSV6 310 aaKnown RBP16.13■□□□□ 0.17
GABRB3-215ENST00000622697 CEP44Q9C0F1 390 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 C3orf18Q9UK00 162 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 TRIM17Q9Y577 477 aa16.13■□□□□ 0.17
GABRB3-215ENST00000622697 CCDC189A1A4V9 331 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 TRIM43BA6NCK2 446 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 KRT87PA6NCN2 255 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 RFXANKO14593 260 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 NCK1P16333 377 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 AQP1P29972 269 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 SLC1A2P43004 574 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 PABPC1LQ4VXU2 614 aaKnown RBP16.12■□□□□ 0.17
GABRB3-215ENST00000622697 GALNT5Q7Z7M9 940 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 ZC3H3Q8IXZ2 948 aaKnown RBP16.12■□□□□ 0.17
GABRB3-215ENST00000622697 ADCY4Q8NFM4 1077 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 ADGRE2Q9UHX3 823 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 EFCAB14O75071 495 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 GOT2P00505 430 aaKnown RBP16.12■□□□□ 0.17
GABRB3-215ENST00000622697 PIGRP01833 764 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 USP46P62068 366 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 INO80DQ53TQ3 878 aaPredicted RBP16.12■□□□□ 0.17
GABRB3-215ENST00000622697 UBR7Q8N806 425 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 CD101Q93033 1021 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 TRMOQ9BU70 441 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 NFKBIZQ9BYH8 718 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 ZCCHC2Q9C0B9 1178 aaKnown RBP16.12■□□□□ 0.17
GABRB3-215ENST00000622697 EPB41L1Q9H4G0 881 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 RAI2Q9Y5P3 530 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 OR51F1A6NGY5 319 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 SLC28A1O00337 649 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 TBX10O75333 385 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 SLC25A14O95258 325 aaPredicted RBP16.12■□□□□ 0.17
GABRB3-215ENST00000622697 MED26O95402 600 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 PKMP14618 531 aaKnown RBP16.12■□□□□ 0.17
GABRB3-215ENST00000622697 PRKCQQ04759 706 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 NR1D2Q14995 579 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 GLYATQ6IB77 296 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 IGDCC3Q8IVU1 814 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 SLC47A1Q96FL8 570 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 CYP2S1Q96SQ9 504 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 SLC7A8Q9UHI5 535 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 FADS3Q9Y5Q0 445 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 FEN1P39748 380 aaKnown RBP16.12■□□□□ 0.17
GABRB3-215ENST00000622697 IKBKEQ14164 716 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 ANGPT1Q15389 498 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 USP41Q3LFD5 358 aa16.12■□□□□ 0.17
GABRB3-215ENST00000622697 REPS1Q96D71 796 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms