RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CXorf49A8MYA2 514 aaPredicted RBP17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 POC1B-GALNT4F8VUJ3 575 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 AREL1O15033 823 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 SPINT1O43278 529 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 C1QAP02745 245 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 IVLP07476 585 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 NDUFV2P19404 249 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 PTSQ03393 145 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 ZBTB16Q05516 673 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 ZNF844Q08AG5 666 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 THOC5Q13769 683 aaKnown RBP17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 GAS6Q14393 721 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 CEP85LQ5SZL2 805 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 AGBL4Q5VU57 503 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 ZNF449Q6P9G9 518 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 MICALCLQ6ZW33 695 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 PPM1NQ8N819 430 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 EPS8L3Q8TE67 593 aaKnown RBP17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 HMGB4Q8WW32 186 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 WRAP53Q9BUR4 548 aaKnown RBP17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 IARS2Q9NSE4 1012 aaKnown RBP17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 ZFATQ9P243 1243 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 SCML1Q9UN30 329 aa17.8■□□□□ 0.44
PTCHD3-202ENST00000622555 NCOR1O75376 2440 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 CCDC162PA2VCL2 907 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 GOLGA8CPA6NN73 597 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 SLC7A4O43246 635 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 GOT2P00505 430 aaKnown RBP17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 C1SP09871 688 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 ELFN1P0C7U0 828 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 ACADMP11310 421 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 GABRG2P18507 467 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 PSMA3P25788 255 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 SLCO1A2P46721 670 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 STC1P52823 247 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 DMTNQ08495 405 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 PTAR1Q7Z6K3 402 aaPredicted RBP17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 OTUD6BQ8N6M0 293 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 MFSD1Q9H3U5 465 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 PSD3Q9NYI0 1048 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 VPS18Q9P253 973 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 SLC17A6Q9P2U8 582 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 SIT1Q9Y3P8 196 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 FADS3Q9Y5Q0 445 aa17.79■□□□□ 0.44
PTCHD3-202ENST00000622555 TLDC2A0PJX2 215 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 OR51F1A6NGY5 319 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 RASGRF2O14827 1237 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 BPIP17213 487 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 SIGLEC14Q08ET2 396 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 NEPROQ6NW34 567 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 AFTPHQ6ULP2 937 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 LIPIQ6XZB0 460 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 HSD11B1LQ7Z5J1 315 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 LRRC6Q86X45 466 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 CLDN23Q96B33 292 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 PAFAH2Q99487 392 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 AGAP2Q99490 1192 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 FAM167BQ9BTA0 163 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 CHRDQ9H2X0 955 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 C2orf42Q9NWW7 574 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 PKD2L2Q9NZM6 624 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 BCCIPQ9P287 314 aaKnown RBP eCLIP17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 ADAM21Q9UKJ8 722 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 NUMA1Q14980 2115 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 TRPM6Q9BX84 2022 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 H0Y858 1186 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 TCEA3O75764 348 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 MC4RP32245 332 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 MSH2P43246 934 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 LIG3P49916 1009 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 SFSWAPQ12872 951 aaKnown RBP17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 NAB1Q13506 487 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 KRT71Q3SY84 523 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 TMEM52BQ4KMG9 183 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 TEDDM1Q5T9Z0 273 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 PGBD3Q8N328 593 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 TSTD1Q8NFU3 115 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 OR4L1Q8NH43 312 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 CALML6Q8TD86 181 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 CXorf40AQ8TE69 158 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 UHRF1Q96T88 793 aaPredicted RBP17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 C19orf43Q9BQ61 176 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 TMEM109Q9BVC6 243 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 ROPN1BQ9BZX4 212 aaPredicted RBP17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 ROPN1Q9HAT0 212 aaPredicted RBP17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 NCKAP1Q9Y2A7 1128 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 IKBKGQ9Y6K9 419 aa17.78■□□□□ 0.44
PTCHD3-202ENST00000622555 H7C0S8 307 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 AP1G1O43747 822 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 UGT1A9O60656 530 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 C7P10643 843 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 SPAM1P38567 509 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 RPS9P46781 194 aaKnown RBP17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 SPINT3P49223 89 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 TAS2R38P59533 333 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 ACOX1Q15067 660 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 ZNF470Q6ECI4 717 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 FAM151BQ6UXP7 276 aa17.77■□□□□ 0.44
PTCHD3-202ENST00000622555 RFLNAQ6ZTI6 216 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms