RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 RIPK3Q9Y572 518 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 KCNE2Q9Y6J6 123 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 CTDSP2O14595 271 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 EDIL3O43854 480 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 KPNA6O60684 536 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 MAP3K6O95382 1288 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 SNAP29O95721 258 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 GSRP00390 522 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 HEXBP07686 556 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 PSMA4P25789 261 aaKnown RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 ADORA2AP29274 412 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 TALDO1P37837 337 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 CDK8P49336 464 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 SLC12A2P55011 1212 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 STX5Q13190 355 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 DPYSL3Q14195 570 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 ZNF267Q14586 743 aaPredicted RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 ATP6AP1Q15904 470 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 SAMD4BQ5PRF9 694 aaKnown RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 RBM48Q5RL73 367 aaKnown RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 ARSKQ6UWY0 536 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 WDR49Q8IV35 697 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 UBQLNLQ8IYU4 475 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 MUS81Q96NY9 551 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 MOGAT1Q96PD6 335 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 ASB2Q96Q27 587 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 PIP5K1AQ99755 562 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 KIFC3Q9BVG8 833 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 RHBGQ9H310 441 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 DBNDD1Q9H9R9 158 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 ZBTB26Q9HCK0 441 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 SPAG4Q9NPE6 437 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 SMYD2Q9NRG4 433 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 TOPORSQ9NS56 1045 aaPredicted RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 NUDT5Q9UKK9 219 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 CDYLQ9Y232 598 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 BTBD3Q9Y2F9 522 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 MN1Q10571 1320 aaPredicted RBP7.92□□□□□ -1.14
VPS11-209ENST00000622309 IRS2Q9Y4H2 1338 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 SCN7AQ01118 1682 aa7.92□□□□□ -1.14
VPS11-209ENST00000622309 DHRS12A0PJE2 317 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 A8MUA0 341 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 LEUTXA8MZ59 168 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 I3L521 148 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 PLD2O14939 933 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 GUCA1CO95843 209 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 CALCAP01258 141 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 OSBPP22059 807 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 PRKCHP24723 683 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 ARRB2P32121 409 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 EPHX2P34913 555 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 NUMBP49757 651 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 OLR1P78380 273 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 FOXK1P85037 733 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 TAP1Q03518 808 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 CSTF3Q12996 717 aaKnown RBP7.91□□□□□ -1.14
VPS11-209ENST00000622309 NFE2L1Q14494 772 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 Q5BKY6 102 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 TMEM198Q66K66 360 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 ZNF767PQ75MW2 155 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 LRRTM3Q86VH5 581 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 LINC00518Q8N0U6 118 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 PPHLN1Q8NEY8 458 aaKnown RBP7.91□□□□□ -1.14
VPS11-209ENST00000622309 SLC2A14Q8TDB8 520 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 MARVELD3Q96A59 401 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 NT5C1BQ96P26 610 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 PPP1R16BQ96T49 567 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 PHOX2BQ99453 314 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 TBC1D13Q9NVG8 400 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 DMAC2Q9NW81 257 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 AFF4Q9UHB7 1163 aaKnown RBP7.91□□□□□ -1.14
VPS11-209ENST00000622309 EMCNQ9ULC0 261 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 SNX7Q9UNH6 387 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 PRORSD1PA6NEY8 169 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 ZNF99A8MXY4 864 aaPredicted RBP7.91□□□□□ -1.14
VPS11-209ENST00000622309 KCNU1A8MYU2 1149 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 H3BMM5 538 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 TOR1AO14656 332 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 PPEF1O14829 653 aaPredicted RBP7.91□□□□□ -1.14
VPS11-209ENST00000622309 ZBTB5O15062 677 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 NCAM2O15394 837 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 ZNF780AO75290 641 aaPredicted RBP7.91□□□□□ -1.14
VPS11-209ENST00000622309 DNAJB5O75953 348 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 ARIH2O95376 493 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 CALB1P05937 261 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 GLAP06280 429 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 ATP2B4P23634 1241 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 CNTFP26441 200 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 GPR85P60893 370 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 FPGSQ05932 587 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 DBPQ10586 325 aaPredicted RBP7.91□□□□□ -1.14
VPS11-209ENST00000622309 TCP10Q12799 353 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 IMPG1Q17R60 797 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 ADPRMQ3LIE5 342 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 ZIK1Q3SY52 487 aaPredicted RBP7.91□□□□□ -1.14
VPS11-209ENST00000622309 SBK1Q52WX2 424 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 GLRA4Q5JXX5 417 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 LAYNQ6UX15 382 aa7.91□□□□□ -1.14
VPS11-209ENST00000622309 SMG8Q8ND04 991 aaKnown RBP7.91□□□□□ -1.14
VPS11-209ENST00000622309 MUL1Q969V5 352 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms