RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 H3BMM5 538 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 H2AFYO75367 372 aaKnown RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 B3GALNT1O75752 331 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 NAT2P11245 290 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 MMP8P22894 467 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 IL1R2P27930 398 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 IRF9Q00978 393 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 LRRC17Q8N6Y2 441 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 TIGARQ9NQ88 270 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 CLEC4AQ9UMR7 237 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 ZNF99A8MXY4 864 aaPredicted RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 PGAM1P18669 254 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 SLC7A1P30825 629 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 ATP12AP54707 1039 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 RPL6Q02878 288 aaKnown RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 COX10Q12887 443 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 PDK2Q15119 407 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 PFKFB4Q16877 469 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 BTBD16Q32M84 506 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 GLYATQ6IB77 296 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 BBS12Q6ZW61 710 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 PHF13Q86YI8 300 aaPredicted RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 CPNE1Q99829 537 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 CNPY3Q9BT09 278 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 COPG1Q9Y678 874 aaKnown RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 PMM2O15305 246 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 CHADO15335 359 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 SSNA1O43805 119 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 ZBTB14O43829 449 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 SH3BGRLO75368 114 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 SYTL2Q9HCH5 934 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 RDH8Q9NYR8 311 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 EN1Q05925 392 aaPredicted RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 BNIP2Q12982 314 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 DDX39BQ13838 428 aaKnown RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 EFR3AQ14156 821 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 GRM3Q14832 879 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 SUZ12Q15022 739 aaKnown RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 PHKG1Q16816 387 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 TPRG1LQ5T0D9 272 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 LIPMQ5VYY2 423 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 PLEKHG7Q6ZR37 379 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 KBTBD6Q86V97 674 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 ABI1Q8IZP0 508 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 DIRAS2Q96HU8 199 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 TRIT1Q9H3H1 467 aaKnown RBP12.49□□□□□ -0.41
SYNRG-229ENST00000621136 COL20A1Q9P218 1284 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 ING4Q9UNL4 249 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 PCDHA11Q9Y5I1 949 aa12.49□□□□□ -0.41
SYNRG-229ENST00000621136 DYRK3O43781 588 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 NCS1P62166 190 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 RACK1P63244 317 aaKnown RBP12.48□□□□□ -0.41
SYNRG-229ENST00000621136 HNRNPDQ14103 355 aaKnown RBP12.48□□□□□ -0.41
SYNRG-229ENST00000621136 SQLEQ14534 574 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 PRMT9Q6P2P2 845 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 CADM3Q8N126 398 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 SCML4Q8N228 414 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 TOR1AIP2Q8NFQ8 470 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 KBTBD8Q8NFY9 601 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 ASIC4Q96FT7 647 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 NECTIN4Q96NY8 510 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 COA1Q9GZY4 146 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 POLIQ9UNA4 740 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 EXTL3O43909 919 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 OR7A10O76100 309 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 MAPTP10636 758 aaKnown RBP12.48□□□□□ -0.41
SYNRG-229ENST00000621136 SLC15A1P46059 708 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 DEFA5Q01523 94 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 MXD4Q14582 209 aaPredicted RBP12.48□□□□□ -0.41
SYNRG-229ENST00000621136 STILQ15468 1287 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 ZACNQ401N2 412 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 C11orf88Q6PI97 169 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 SPATC1Q76KD6 591 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 GMCL1P1Q8NEA9 526 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 OR5B17Q8NGF7 314 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 OR5H6Q8NGV6 325 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 RNFT2Q96EX2 444 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 PNPLA8Q9NP80 782 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 MPP6Q9NZW5 540 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 ACTR3BQ9P1U1 418 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 MLXQ9UH92 298 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 PLD2O14939 933 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 CPSF4O95639 269 aaKnown RBP12.48□□□□□ -0.41
SYNRG-229ENST00000621136 SERPINA1P01009 418 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 MPOP05164 745 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 MSL3P1P0C860 447 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 SMIM18P0DKX4 95 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 SNAPC1Q16533 368 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 OR52K2Q8NGK3 314 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 JPH3Q8WXH2 748 aaPredicted RBP12.48□□□□□ -0.41
SYNRG-229ENST00000621136 ERVK13-1Q9NX77 482 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 PLOD2O00469 737 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 PLATP00750 562 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 SLC2A4P14672 509 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 CD247P20963 164 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 MAP2K4P45985 399 aa12.48□□□□□ -0.41
SYNRG-229ENST00000621136 RPS3AP61247 264 aaKnown RBP12.48□□□□□ -0.41
SYNRG-229ENST00000621136 RHDQ02161 417 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms