RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 BCAP31P51572 246 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 MAP3K7CLP57077 242 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 RAB10P61026 200 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 MRPS15P82914 257 aaKnown RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 LRRC74AQ0VAA2 488 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 TWF1Q12792 350 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 DNASE1L3Q13609 305 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 GTF2H3Q13889 308 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 PGS1Q32NB8 556 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 PLA2G4EQ3MJ16 856 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 EPHX4Q8IUS5 362 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 RAVER1Q8IY67 606 aaKnown RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 MICU2Q8IYU8 434 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 LZTR1Q8N653 840 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 TBC1D15Q8TC07 691 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 STYXQ8WUJ0 223 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 BORCS5Q969J3 196 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 TMEM74Q96NL1 305 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 KCNA7Q96RP8 456 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 THUMPD3Q9BV44 507 aaKnown RBP6.96□□□□□ -1.29
NEDD9-216ENST00000620854 APOL5Q9BWW9 433 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 RHOJQ9H4E5 214 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 VPS45Q9NRW7 570 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 CD274Q9NZQ7 290 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 DAPK2Q9UIK4 370 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 NUDT5Q9UKK9 219 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 FZD10Q9ULW2 581 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 SQORQ9Y6N5 450 aa6.96□□□□□ -1.29
NEDD9-216ENST00000620854 A0A0J9YYE9 177 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 CFAP99D6REC4 459 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 SERPINB7O75635 380 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 ALBP02768 609 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 MMP3P08254 477 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 PROZP22891 400 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 MATKP42679 507 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 VEPH1Q14D04 833 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 ZNF829Q3KNS6 432 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-216ENST00000620854 MIER2Q8N344 545 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 IRGQQ8WZA9 623 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 HEPHQ9BQS7 1158 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 ANKRD60Q9BZ19 345 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 WDCPQ9H6R7 721 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 POLE4Q9NR33 117 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 ERI2A8K979 691 aaKnown RBP6.96□□□□□ -1.3
NEDD9-216ENST00000620854 H0Y626 953 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 NME4O00746 187 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 XYLBO75191 536 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 RSL1D1O76021 490 aaKnown RBP6.96□□□□□ -1.3
NEDD9-216ENST00000620854 TRIM16O95361 564 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 LINC00032P0C843 101 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 POLR2IP36954 125 aaKnown RBP6.96□□□□□ -1.3
NEDD9-216ENST00000620854 CLK1P49759 484 aaKnown RBP6.96□□□□□ -1.3
NEDD9-216ENST00000620854 BST2Q10589 180 aaKnown RBP6.96□□□□□ -1.3
NEDD9-216ENST00000620854 MAMDC4Q6UXC1 1216 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 SLC26A9Q7LBE3 791 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 ADCK1Q86TW2 530 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 RALGPS2Q86X27 583 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-216ENST00000620854 CPSF7Q8N684 471 aaKnown RBP6.96□□□□□ -1.3
NEDD9-216ENST00000620854 ANKRD52Q8NB46 1076 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 CD99L2Q8TCZ2 262 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 HASPINQ8TF76 798 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 NUDT8Q8WV74 236 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 HPS1Q92902 700 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 MUS81Q96NY9 551 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 HBEGFQ99075 208 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 FICDQ9BVA6 458 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 TRIM62Q9BVG3 475 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 HERC2P3Q9BVR0 1158 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 C1QTNF1Q9BXJ1 281 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 SLAMF8Q9P0V8 285 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 SUCOQ9UBS9 1254 aaKnown RBP6.96□□□□□ -1.3
NEDD9-216ENST00000620854 MOSPD1Q9UJG1 213 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 ADAM28Q9UKQ2 775 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 PNMA8BQ9ULN7 279 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-216ENST00000620854 TRAF6Q9Y4K3 522 aa6.96□□□□□ -1.3
NEDD9-216ENST00000620854 ZFC3H1O60293 1989 aaKnown RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 WDR81Q562E7 1941 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TMEM221A6NGB7 291 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 HACD1B0YJ81 288 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 SLCO1B7G3V0H7 640 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 DUSP11O75319 330 aaKnown RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 HLA-DPA1P20036 260 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 CCNA2P20248 432 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TKTP29401 623 aaKnown RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 HOXD12P35452 270 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 SLC1A2P43004 574 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 KCNC1P48547 511 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 IST1P53990 364 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 RAD23AP54725 363 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 KCNK10P57789 538 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 PFKPQ01813 784 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 FPGSQ05932 587 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 RGS21Q2M5E4 152 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 FBXO47Q5MNV8 452 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 LDLRAD1Q5T700 205 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 PPP4R4Q6NUP7 873 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 ESAMQ96AP7 390 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 OTULINQ96BN8 352 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 BIRC8Q96P09 236 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 GPR22Q99680 433 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms