RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 CES2O00748 559 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 METTL18O95568 372 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 AGTP01019 485 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 IFNB1P01574 187 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 FGF1P05230 155 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 GOLGA6DP0CG33 693 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 TSHRP16473 764 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 ADRA1AP35348 466 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 TRIM23P36406 574 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 NFATC4Q14934 902 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 SUZ12Q15022 739 aaKnown RBP18.25■□□□□ 0.51
LITAF-220ENST00000620789 DBX2Q6ZNG2 339 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 PIP4P1Q86T03 277 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 NRSN1Q8IZ57 195 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 PELI3Q8N2H9 469 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 PRELID2Q8N945 189 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 SAP25Q8TEE9 199 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 COG1Q8WTW3 980 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 EID2BQ96D98 161 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 WDR24Q96S15 920 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 NAP1L3Q99457 506 aaPredicted RBP18.25■□□□□ 0.51
LITAF-220ENST00000620789 ABCG8Q9H221 673 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 GOLGA6AQ9NYA3 693 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 PKD2L2Q9NZM6 624 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 SHOC2Q9UQ13 582 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 SPO11Q9Y5K1 396 aa18.25■□□□□ 0.51
LITAF-220ENST00000620789 DCDC2BA2VCK2 349 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 RGSL1A5PLK6 1076 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 PGRMC1O00264 195 aaKnown RBP18.24■□□□□ 0.51
LITAF-220ENST00000620789 FLRT2O43155 660 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 CSRP1P21291 193 aaKnown RBP18.24■□□□□ 0.51
LITAF-220ENST00000620789 HTR1BP28222 390 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 TEAD1P28347 426 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 SPINT3P49223 89 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 BNIP3Q12983 259 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 RANBP10Q6VN20 620 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 TMC3Q7Z5M5 1100 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 NLRP8Q86W28 1048 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 NAXDQ8IW45 347 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 CCDC89Q8N998 374 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 ACTRT1Q8TDG2 376 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 SCAMP4Q969E2 229 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 FUBP1Q96AE4 644 aaKnown RBP18.24■□□□□ 0.51
LITAF-220ENST00000620789 LRRC45Q96CN5 670 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 AP2M1Q96CW1 435 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 GPR63Q9BZJ6 419 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 TRABDQ9H4I3 376 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 WDR26Q9H7D7 661 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 DNAJC28Q9NX36 388 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 HACD3Q9P035 362 aa18.24■□□□□ 0.51
LITAF-220ENST00000620789 CACNB4O00305 520 aaPredicted RBP18.23■□□□□ 0.51
LITAF-220ENST00000620789 SH3BP5O60239 455 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 SLC4A1P02730 911 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 CSF2P04141 144 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 HOXC4P09017 264 aaPredicted RBP18.23■□□□□ 0.51
LITAF-220ENST00000620789 NME1P15531 152 aaKnown RBP18.23■□□□□ 0.51
LITAF-220ENST00000620789 TCP1P17987 556 aaKnown RBP18.23■□□□□ 0.51
LITAF-220ENST00000620789 ACTN2P35609 894 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 KIAA1024LP59773 190 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 EIF2B5Q13144 721 aaKnown RBP18.23■□□□□ 0.51
LITAF-220ENST00000620789 OLIG2Q13516 323 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 ZNF542PQ5EBM4 170 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 FAXCQ5TGI0 409 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 KCTD11Q693B1 232 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 RAET1GQ6H3X3 334 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 GATAD2AQ86YP4 633 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 TAB3Q8N5C8 712 aaPredicted RBP18.23■□□□□ 0.51
LITAF-220ENST00000620789 NAPGQ99747 312 aaPredicted RBP18.23■□□□□ 0.51
LITAF-220ENST00000620789 TBL1YQ9BQ87 522 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 APOL2Q9BQE5 337 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 RIOK2Q9BVS4 552 aaKnown RBP18.23■□□□□ 0.51
LITAF-220ENST00000620789 LRRC40Q9H9A6 602 aa18.23■□□□□ 0.51
LITAF-220ENST00000620789 CABIN1Q9Y6J0 2220 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 AURKAO14965 403 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 ZNF185O15231 689 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 SDC3O75056 442 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 USP12O75317 370 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 SOD1P00441 154 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 PYGLP06737 847 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 MYCLP1P12525 358 aaPredicted RBP18.22■□□□□ 0.51
LITAF-220ENST00000620789 ETS1P14921 441 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 GPR1P46091 355 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 KCNJ1P48048 391 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 HNRNPKP61978 463 aaKnown RBP eCLIP18.22■□□□□ 0.516e-8■□□□□ 11.1
LITAF-220ENST00000620789 INAVAQ3KP66 663 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 PAPD7Q5XG87 772 aaKnown RBP18.22■□□□□ 0.51
LITAF-220ENST00000620789 KANSL1Q7Z3B3 1105 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 PRUNE1Q86TP1 453 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 HEATR4Q86WZ0 1026 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 C17orf53Q8N3J3 647 aaPredicted RBP18.22■□□□□ 0.51
LITAF-220ENST00000620789 GLIS1Q8NBF1 620 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 DEFB124Q8NES8 71 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 ATL2Q8NHH9 583 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 BLOC1S5Q8TDH9 187 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 SETD7Q8WTS6 366 aaKnown RBP18.22■□□□□ 0.51
LITAF-220ENST00000620789 WDR92Q96MX6 357 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 LGR4Q9BXB1 951 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 AP1M1Q9BXS5 423 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 TEX101Q9BY14 249 aa18.22■□□□□ 0.51
LITAF-220ENST00000620789 CDH19Q9H159 772 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms