RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CDK3Q00526 305 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 PTSQ03393 145 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 RAET1GQ6H3X3 334 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 CNGA4Q8IV77 575 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 RHOT2Q8IXI1 618 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 FAM46DQ8NEK8 389 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 GPR156Q8NFN8 814 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 ABCG8Q9H221 673 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 POLR1BQ9H9Y6 1135 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 CARS2Q9HA77 564 aaKnown RBP17.14■□□□□ 0.33
HMGN3-203ENST00000620514 AMACRQ9UHK6 382 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 HEY1Q9Y5J3 304 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 CACNA1GO43497 2377 aa17.14■□□□□ 0.33
HMGN3-203ENST00000620514 PDE2AO00408 941 aaPredicted RBP17.13■□□□□ 0.33
HMGN3-203ENST00000620514 NOBOXO60393 691 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 TCEA3O75764 348 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 SOD1P00441 154 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 TNNT1P13805 278 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 CES1P23141 567 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 ABCG1P45844 678 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 LSSP48449 732 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 POLD2P49005 469 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 EPHB1P54762 984 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 PPIDQ08752 370 aaKnown RBP17.13■□□□□ 0.33
HMGN3-203ENST00000620514 ZBTB17Q13105 803 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 C3orf38Q5JPI3 329 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 SLC9A4Q6AI14 798 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 OGFOD3Q6PK18 319 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 NPNTQ6UXI9 565 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 NDUFAF2Q8N183 169 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 CNTD1Q8N815 330 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 LPCAT1Q8NF37 534 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 SCAMP4Q969E2 229 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 RNF25Q96BH1 459 aaPredicted RBP17.13■□□□□ 0.33
HMGN3-203ENST00000620514 FRMD8Q9BZ67 464 aaPredicted RBP17.13■□□□□ 0.33
HMGN3-203ENST00000620514 KCTD5Q9NXV2 234 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 SATB2Q9UPW6 733 aa17.13■□□□□ 0.33
HMGN3-203ENST00000620514 A0A1W2PQM1 296 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 CAPN8A6NHC0 703 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 ZNF487B1APH4 448 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 B4DGG1 531 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 NTN3O00634 580 aaPredicted RBP17.12■□□□□ 0.33
HMGN3-203ENST00000620514 MMP2P08253 660 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 KRT10P13645 584 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 CD86P42081 329 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 GPR1P46091 355 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 STC1P52823 247 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 CCL7P80098 99 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 CCDC173Q0VFZ6 552 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 SPIDRQ14159 915 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 DOK6Q6PKX4 331 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 SARM1Q6SZW1 724 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 LRRC69Q6ZNQ3 347 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 B4GALNT4Q76KP1 1039 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 NRROSQ86YC3 692 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 RFX6Q8HWS3 928 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 TC2NQ8N9U0 490 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.12■□□□□ 0.33
HMGN3-203ENST00000620514 AP2M1Q96CW1 435 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 ZNF830Q96NB3 372 aaPredicted RBP17.12■□□□□ 0.33
HMGN3-203ENST00000620514 AGAP2Q99490 1192 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 CEP41Q9BYV8 373 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 PCDH9Q9HC56 1237 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 SUFUQ9UMX1 484 aa17.12■□□□□ 0.33
HMGN3-203ENST00000620514 APOL1O14791 398 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 RRP8O43159 456 aaKnown RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 DXOO77932 396 aaKnown RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 CLDN7O95471 211 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 RPLP0P05388 317 aaKnown RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 COMTP21964 271 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 AK4P27144 223 aaPredicted RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 TEAD1P28347 426 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 GNPDA1P46926 289 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 DYNLT1P63172 113 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 IFI35P80217 286 aaPredicted RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 SKOR1P84550 965 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 DPTQ07507 201 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 AP1B1Q10567 949 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 TCEAL1Q15170 157 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 LRRC38Q5VT99 294 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 MFSD7Q6UXD7 560 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 B3GNT8Q7Z7M8 397 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 TRIM74Q86UV6 250 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 VSIG1Q86XK7 387 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 Q8N9G6 341 aaPredicted RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 WDR48Q8TAF3 677 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 GPBAR1Q8TDU6 330 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 PRR11Q96HE9 360 aaPredicted RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 NAF1Q96HR8 494 aaKnown RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 ZNF578Q96N58 590 aaPredicted RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 MAK16Q9BXY0 300 aaKnown RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 TRIM5Q9C035 493 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 DPEP2Q9H4A9 486 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 ASCL3Q9NQ33 180 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 SPATS2LQ9NUQ6 558 aaKnown RBP17.11■□□□□ 0.33
HMGN3-203ENST00000620514 HAUS2Q9NVX0 235 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 INTUQ9ULD6 942 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 TFR2Q9UP52 801 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 TMEM98Q9Y2Y6 226 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 ST14Q9Y5Y6 855 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms