RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 TREML1Q86YW5 311 aa19.02■□□□□ 0.64
PSPC1-206ENST00000619300 OR6K2Q8NGY2 324 aa19.02■□□□□ 0.64
PSPC1-206ENST00000619300 RIN3Q8TB24 985 aa19.02■□□□□ 0.64
PSPC1-206ENST00000619300 LPGAT1Q92604 370 aa19.02■□□□□ 0.64
PSPC1-206ENST00000619300 RPL26L1Q9UNX3 145 aaKnown RBP19.02■□□□□ 0.64
PSPC1-206ENST00000619300 H7C0S8 307 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 HTRA2O43464 458 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-206ENST00000619300 NPHS1O60500 1241 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 DIAPH2O60879 1101 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 CLASP2O75122 1294 aaKnown RBP19.01■□□□□ 0.63
PSPC1-206ENST00000619300 ZNF821O75541 412 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-206ENST00000619300 HNRNPA1P09651 372 aaKnown RBP eCLIP19.01■□□□□ 0.63
PSPC1-206ENST00000619300 MPSTP25325 297 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 HLA-FP30511 346 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 MC4RP32245 332 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 CCR10P46092 362 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 CDKN1CP49918 316 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-206ENST00000619300 HK2P52789 917 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 TBCCQ15814 346 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 SLC5A9Q2M3M2 681 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 PITRM1Q5JRX3 1037 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 TRIM67Q6ZTA4 783 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 PIWIL4Q7Z3Z4 852 aaKnown RBP19.01■□□□□ 0.63
PSPC1-206ENST00000619300 ISCA2Q86U28 154 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 LSMEM2Q8N112 164 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 CCNYL1Q8N7R7 359 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 LEMD2Q8NC56 503 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 MTIF3Q9H2K0 278 aaKnown RBP19.01■□□□□ 0.63
PSPC1-206ENST00000619300 POMKQ9H5K3 350 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 TLE6Q9H808 572 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 NCKIPSDQ9NZQ3 722 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 IL17CQ9P0M4 197 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 VPS9D1Q9Y2B5 631 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 ZNF711Q9Y462 761 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 UBA6A0AVT1 1052 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-206ENST00000619300 MATN2O00339 956 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 XYLBO75191 536 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 CTPS1P17812 591 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 TFEBP19484 476 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 FMO4P31512 558 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 RIPK1Q13546 671 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 PEX6Q13608 980 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 DGKKQ5KSL6 1271 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 PIANPQ8IYJ0 282 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 CNDP1Q96KN2 507 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 RPL10LQ96L21 214 aaKnown RBP19.01■□□□□ 0.63
PSPC1-206ENST00000619300 BTBD10Q9BSF8 475 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 GPR63Q9BZJ6 419 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 PKP3Q9Y446 797 aa19.01■□□□□ 0.63
PSPC1-206ENST00000619300 MTF2Q9Y483 593 aaPredicted RBP19.01■□□□□ 0.63
PSPC1-206ENST00000619300 A0A0U1RQS6 177 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 NEMP2A6NFY4 417 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 PFDN6O15212 129 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 SOCS5O75159 536 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 IPO13O94829 963 aaKnown RBP19■□□□□ 0.63
PSPC1-206ENST00000619300 SNUPNO95149 360 aaKnown RBP19■□□□□ 0.63
PSPC1-206ENST00000619300 PRAMEF12O95522 483 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 IGSF6O95976 241 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 PENKP01210 267 aaPredicted RBP19■□□□□ 0.63
PSPC1-206ENST00000619300 RB1P06400 928 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 HMGCLP35914 325 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 SERPINB5P36952 375 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 TTPAP49638 278 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 LONP2Q86WA8 852 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 AGR3Q8TD06 166 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 CCDC68Q9H2F9 335 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 TNKS2Q9H2K2 1166 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 ALG9Q9H6U8 611 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 ZDHHC2Q9UIJ5 367 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 EPB41L3Q9Y2J2 1087 aaPredicted RBP19■□□□□ 0.63
PSPC1-206ENST00000619300 A8MT66 165 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 HDAC3O15379 428 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 SRP72O76094 671 aaKnown RBP19■□□□□ 0.63
PSPC1-206ENST00000619300 ARHGEF15O94989 841 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 ALPIP09923 528 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 HSPA1AP0DMV8 641 aaKnown RBP19■□□□□ 0.63
PSPC1-206ENST00000619300 HSPA1BP0DMV9 641 aaKnown RBP19■□□□□ 0.63
PSPC1-206ENST00000619300 MYOGP15173 224 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 CD1DP15813 335 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 KCNA5P22460 613 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 GKP32189 559 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 CTSOP43234 321 aaPredicted RBP19■□□□□ 0.63
PSPC1-206ENST00000619300 KCNC1P48547 511 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 NTHL1P78549 312 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 PDAP1Q13442 181 aaKnown RBP19■□□□□ 0.63
PSPC1-206ENST00000619300 ZRANB3Q5FWF4 1079 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 PSAPL1Q6NUJ1 521 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 LYSMD3Q7Z3D4 306 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 SLC22A9Q8IVM8 553 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 OR2AP1Q8NGE2 309 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 IRF7Q92985 503 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 EID2BQ96D98 161 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 ATP13A3Q9H7F0 1226 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 TAS2R13Q9NYV9 303 aa19■□□□□ 0.63
PSPC1-206ENST00000619300 PRR5-ARHGAP8B1AHC4 643 aa18.99■□□□□ 0.63
PSPC1-206ENST00000619300 SLCO1B7G3V0H7 640 aa18.99■□□□□ 0.63
PSPC1-206ENST00000619300 RHOBTB1O94844 696 aa18.99■□□□□ 0.63
PSPC1-206ENST00000619300 ENO1P06733 434 aaKnown RBP18.99■□□□□ 0.63
PSPC1-206ENST00000619300 SRCP12931 536 aa18.99■□□□□ 0.63
PSPC1-206ENST00000619300 ZNF37AP17032 561 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms