RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 POU4F1Q01851 419 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 GEN1Q17RS7 908 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 TMEM215Q68D42 235 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 AFTPHQ6ULP2 937 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 Q6ZVU0 165 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 LYSMD3Q7Z3D4 306 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 SDCCAG8Q86SQ7 713 aaPredicted RBP12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 CYB5D2Q8WUJ1 264 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 OSCP1Q8WVF1 389 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 PIH1D2Q8WWB5 315 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 ISG20Q96AZ6 181 aaKnown RBP12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 EBF3Q9H4W6 596 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 NMRAL1Q9HBL8 299 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 ARMCX1Q9P291 453 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 COPG2Q9UBF2 871 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 RUVBL2Q9Y230 463 aaKnown RBP12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 ANKRD6Q9Y2G4 727 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 C2orf16Q68DN1 1984 aa12.7□□□□□ -0.38
TNFAIP3-209ENST00000619035 UBA6A0AVT1 1052 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 TGDSO95455 350 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 CPA3P15088 417 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 ARSAP15289 507 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 CRABP2P29373 138 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 MC4RP32245 332 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 CCNHP51946 323 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 ZBTB16Q05516 673 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 CTC1Q2NKJ3 1217 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 HECTD2Q5U5R9 776 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 GPR149Q86SP6 731 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 CENPLQ8N0S6 344 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 AHI1Q8N157 1196 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 BPIFB1Q8TDL5 484 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 FAM136AQ96C01 138 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 C7orf26Q96N11 449 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 ASB16Q96NS5 453 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 FAM96AQ9H5X1 160 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 HACD3Q9P035 362 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 PKP3Q9Y446 797 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 REV3LO60673 3130 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 C1orf232A0A0U1RR37 186 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 TK2O00142 265 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 SOCS5O75159 536 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 ADH1CP00326 375 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 DGKGP49619 791 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 CDKN1CP49918 316 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 AQP5P55064 265 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 RPL26P61254 145 aaKnown RBP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 SEMG2Q02383 582 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 ITGA9Q13797 1035 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 MYLK3Q32MK0 819 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 EML3Q32P44 896 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 ZRANB3Q5FWF4 1079 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 DPY19L3Q6ZPD9 716 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 KIAA0907Q7Z7F0 614 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 GALNT7Q86SF2 657 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 C12orf40Q86WS4 652 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 CRLF3Q8IUI8 442 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 PARP9Q8IXQ6 854 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 TTC30BQ8N4P2 665 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 GRIN3AQ8TCU5 1115 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 SCG3Q8WXD2 468 aaKnown RBP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 SMARCD2Q92925 531 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 UTP4Q969X6 686 aaKnown RBP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 SKA1Q96BD8 255 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 EBF4Q9BQW3 602 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 C1QTNF1Q9BXJ1 281 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 CEP44Q9C0F1 390 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 NSUN3Q9H649 340 aaKnown RBP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 TRPV4Q9HBA0 871 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 ARHGEF3Q9NR81 526 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 ARL8BQ9NVJ2 186 aa12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 RPL26L1Q9UNX3 145 aaKnown RBP12.69□□□□□ -0.38
TNFAIP3-209ENST00000619035 SZT2Q5T011 3432 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 HTRA2O43464 458 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 HOXB8P17481 243 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 PSMA3P25788 255 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 SLC1A6P48664 564 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 CSRP3P50461 194 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 STC1P52823 247 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 CDKN2DP55273 166 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 CARD16Q5EG05 197 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 PIM3Q86V86 326 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 ZSWIM9Q86XI8 627 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 TDHQ8IZJ6 230 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 PCDH20Q8N6Y1 951 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 GPR150Q8NGU9 434 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 TTC8Q8TAM2 541 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 ZNF398Q8TD17 642 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 NXNL1Q96CM4 212 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 SLC7A6OSQ96CW6 309 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 C19orf43Q9BQ61 176 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 NMUR2Q9GZQ4 415 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 MAGEE1Q9HCI5 957 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 GPAMQ9HCL2 828 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 PNPOQ9NVS9 261 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 LMCD1Q9NZU5 365 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 ERVW-1Q9UQF0 538 aa12.68□□□□□ -0.38
TNFAIP3-209ENST00000619035 DNAJC16Q9Y2G8 782 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms