RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CDX4O14627 284 aaPredicted RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 WNT9AO14904 365 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 AREL1O15033 823 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CHUKO15111 745 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 HTRA2O43464 458 aaPredicted RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 PHF2O75151 1096 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 RNASEH2AO75792 299 aaKnown RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ATP5HO75947 161 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 IGSF6O95976 241 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 FGGP02679 453 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 IGHV4-34P06331 123 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 PDHA1P08559 390 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ADRB1P08588 477 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 RBP3P10745 1247 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ETS1P14921 441 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ENGP17813 658 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 GM2AP17900 193 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ITPKAP23677 461 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 MAOBP27338 520 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CD38P28907 300 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 GRK6P43250 576 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ATP5OP48047 213 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 SCNN1BP51168 640 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 NEK3P51956 506 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 PMS2P54278 862 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ADPRHP54922 357 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 GDF10P55107 478 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 C21orf59P57076 290 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 EIF3EP60228 445 aaKnown RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 YPEL5P62699 121 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 IRX4P78413 519 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ACTN3Q08043 901 aaPredicted RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 DHX9Q08211 1270 aaKnown RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ELP6Q0PNE2 266 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 AP1B1Q10567 949 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 RALGDSQ12967 914 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CALCOCO2Q13137 446 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 OLIG2Q13516 323 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 PEX6Q13608 980 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 FGL2Q14314 439 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF235Q14590 738 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 AGERQ15109 404 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 RASA2Q15283 850 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CCDC6Q16204 474 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 LRRK1Q38SD2 2015 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 TEX44Q53QW1 395 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 TTMPQ5BVD1 217 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF805Q5CZA5 627 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 MARC1Q5VT66 337 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 SEL1L3Q68CR1 1132 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 DENND2CQ68D51 928 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 KDELC1Q6UW63 502 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 GDPD4Q6W3E5 623 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ERN2Q76MJ5 926 aaKnown RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ARMCX6Q7L4S7 300 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CPLX4Q7Z7G2 160 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 PIP4P1Q86T03 277 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 KLHL7Q8IXQ5 586 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CACNA2D3Q8IZS8 1091 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF567Q8N184 647 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 RIBC1Q8N443 379 aaPredicted RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 DCLK2Q8N568 766 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 PRELID2Q8N945 189 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CCNYQ8ND76 341 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 SPATA22Q8NHS9 363 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CFAP61Q8NHU2 1237 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF473Q8WTR7 871 aaKnown RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 NSMCE1Q8WV22 266 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 TFB1MQ8WVM0 346 aaKnown RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 UBLCP1Q8WVY7 318 aaPredicted RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 C1orf54Q8WWF1 131 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ARL8AQ96BM9 186 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 TLCD1Q96CP7 247 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ECHDC3Q96DC8 303 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CHMP6Q96FZ7 201 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 OXNAD1Q96HP4 312 aaPredicted RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 TEKT5Q96M29 485 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 AGAP3Q96P47 875 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 NUDCD1Q96RS6 583 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 TRIB3Q96RU7 358 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 SRPK1Q96SB4 655 aaKnown RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 SEMA3CQ99985 751 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 MLPHQ9BV36 600 aaPredicted RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 CINPQ9BW66 212 aaPredicted RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 GPR174Q9BXC1 333 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 FRMD8P1Q9BZ68 369 aaPredicted RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 TXLNGYQ9BZA5 131 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 SMOC1Q9H4F8 434 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 SUV39H2Q9H5I1 410 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 GLOD4Q9HC38 313 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 TMEM74BQ9NUR3 256 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 SEPT10Q9P0V9 454 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 ZFR2Q9UPR6 939 aaKnown RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 USP24Q9UPU5 2620 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 PCDHGA1Q9Y5H4 931 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 FADS3Q9Y5Q0 445 aa5.27□□□□□ -1.57
SHMT1-211ENST00000618902 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.27□□□□□ -1.57
SHMT1-211ENST00000618902 MAP1BP46821 2468 aaKnown RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 PKD1L2Q7Z442 2459 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 KALRNO60229 2985 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms