RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 GIMAP2Q9UG22 337 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 SIX4Q9UIU6 781 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 ZNF112Q9UJU3 913 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 FZD10Q9ULW2 581 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.52■□□□□ 0.88
PCSK6-217ENST00000618548 TSC22D2O75157 780 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 CCNKO75909 580 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 RECQL5O94762 991 aaPredicted RBP20.52■□□□□ 0.88
PCSK6-217ENST00000618548 DPEP1P16444 411 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 RPL10P27635 214 aaKnown RBP20.52■□□□□ 0.88
PCSK6-217ENST00000618548 PCSK6P29122 969 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 EFEMP1Q12805 493 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 C10orf120Q5SQS8 335 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 EHD3Q9NZN3 535 aa20.52■□□□□ 0.88
PCSK6-217ENST00000618548 LHX1P48742 406 aa20.52■□□□□ 0.87
PCSK6-217ENST00000618548 GLUD2P49448 558 aa20.52■□□□□ 0.87
PCSK6-217ENST00000618548 RABGGTBP53611 331 aa20.52■□□□□ 0.87
PCSK6-217ENST00000618548 INHBCP55103 352 aa20.52■□□□□ 0.87
PCSK6-217ENST00000618548 CYP4F2P78329 520 aa20.52■□□□□ 0.87
PCSK6-217ENST00000618548 CYP4F3Q08477 520 aa20.52■□□□□ 0.87
PCSK6-217ENST00000618548 SPPL2AQ8TCT8 520 aa20.52■□□□□ 0.87
PCSK6-217ENST00000618548 ZNF512Q96ME7 567 aaPredicted RBP20.52■□□□□ 0.87
PCSK6-217ENST00000618548 ACTR8Q9H981 624 aa20.52■□□□□ 0.87
PCSK6-217ENST00000618548 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.52■□□□□ 0.871e-8■■■□□ 16
PCSK6-217ENST00000618548 CEPT1Q9Y6K0 416 aa20.52■□□□□ 0.87
PCSK6-217ENST00000618548 FFAR3O14843 346 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 GPR42O15529 346 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 ANGPTL1O95841 491 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 SERPINF2P08697 491 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 TKTP29401 623 aaKnown RBP20.51■□□□□ 0.87
PCSK6-217ENST00000618548 EPHX2P34913 555 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 FGD3Q5JSP0 725 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 IQSEC1Q6DN90 963 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 ARMCX6Q7L4S7 300 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 PACRGLQ8N7B6 248 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 TOP1MTQ969P6 601 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 DUSP16Q9BY84 665 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 ENDOD1O94919 500 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 LMO2P25791 158 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 CHRNA4P43681 627 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 DNASE1L3Q13609 305 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 SIX5Q8N196 739 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 BIRC8Q96P09 236 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 OLFM1Q99784 485 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 COLEC11Q9BWP8 271 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 RRN3P2A6NIE6 340 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 NDUFS2O75306 463 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 LGALS2P05162 132 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 ATP6V1E1P36543 226 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 POLR2JP52435 117 aaKnown RBP20.51■□□□□ 0.87
PCSK6-217ENST00000618548 KLHL5Q96PQ7 755 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 FEM1AQ9BSK4 669 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 TSEN34Q9BSV6 310 aaKnown RBP20.51■□□□□ 0.87
PCSK6-217ENST00000618548 AKTIPQ9H8T0 292 aa20.51■□□□□ 0.87
PCSK6-217ENST00000618548 CLPXO76031 633 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 TRIP4Q15650 581 aaPredicted RBP20.5■□□□□ 0.87
PCSK6-217ENST00000618548 TMEM110Q86TL2 294 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 RSPH1Q8WYR4 309 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 SENP8Q96LD8 212 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 TEKT5Q96M29 485 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 GPR22Q99680 433 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 CINPQ9BW66 212 aaPredicted RBP20.5■□□□□ 0.87
PCSK6-217ENST00000618548 CATSPERZQ9NTU4 200 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 SMOXQ9NWM0 555 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 MPP6Q9NZW5 540 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 A8MT66 165 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 SDHDO14521 159 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 DPYSL4O14531 572 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 LRIG2O94898 1065 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 SIX3O95343 332 aaPredicted RBP20.5■□□□□ 0.87
PCSK6-217ENST00000618548 UMPSP11172 480 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 ARHGAP17Q68EM7 881 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 NIPAL1Q6NVV3 410 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 PDZD7Q9H5P4 517 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 EMCNQ9ULC0 261 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 CENPXA8MT69 81 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 SOCS2O14508 198 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 RELAQ04206 551 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 UGT3A1Q6NUS8 523 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 TMEM53Q6P2H8 277 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 ESAMQ96AP7 390 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 BCO2Q9BYV7 579 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 SFMBT1Q9UHJ3 866 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 PRORSD1PA6NEY8 169 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 TBX1O43435 398 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 RPL38P63173 70 aaKnown RBP20.5■□□□□ 0.87
PCSK6-217ENST00000618548 ARHGEF7Q14155 803 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 PLPPR4Q7Z2D5 763 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 P2RY8Q86VZ1 359 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 LRRC58Q96CX6 371 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 WDR83Q9BRX9 315 aaKnown RBP20.5■□□□□ 0.87
PCSK6-217ENST00000618548 MINDY3Q9H8M7 445 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 TRMT13Q9NUP7 481 aaKnown RBP20.5■□□□□ 0.87
PCSK6-217ENST00000618548 KLQ9UEF7 1012 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 TCAF1Q9Y4C2 921 aa20.5■□□□□ 0.87
PCSK6-217ENST00000618548 UBXN8O00124 270 aa20.49■□□□□ 0.87
PCSK6-217ENST00000618548 KPNA1P52294 538 aaPredicted RBP20.49■□□□□ 0.87
PCSK6-217ENST00000618548 PTPRNQ16849 979 aa20.49■□□□□ 0.87
PCSK6-217ENST00000618548 RABL3Q5HYI8 236 aa20.49■□□□□ 0.87
PCSK6-217ENST00000618548 GPRIN3Q6ZVF9 776 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms