RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 VCPP55072 806 aaKnown RBP12.1□□□□□ -0.47
SRRT-216ENST00000618262 C16orf72Q14CZ0 275 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 SPATS1Q496A3 300 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 POTEHQ6S545 545 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 DCDC5Q6ZRR9 648 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 CCDC185Q8N715 623 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 RFWD2Q8NHY2 731 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 WBP2Q969T9 261 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 ZNF566Q969W8 418 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 ZSWIM3Q96MP5 696 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 DPH5Q9H2P9 285 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 PRDM6Q9NQX0 595 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 CCL26Q9Y258 94 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 CCDC78A2IDD5 438 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 PRR23AA6NEV1 266 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 SOBPA7XYQ1 873 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 RHOP08100 348 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 CD48P09326 243 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 SRGAP2BP0DMP2 458 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 GPD1P21695 349 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 TNFRSF8P28908 595 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 GDI2P50395 445 aaKnown RBP12.1□□□□□ -0.47
SRRT-216ENST00000618262 DYNLT1P63172 113 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 TEAD2Q15562 447 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 LRIT3Q3SXY7 679 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 TPGS2Q68CL5 300 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 ALG1LQ6GMV1 187 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 ABRAXAS1Q6UWZ7 409 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 TAC4Q86UU9 113 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 NKAIN4Q8IVV8 208 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 TCEAL8Q8IYN2 117 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 TTC8Q8TAM2 541 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 ENKURQ8TC29 256 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 LMAN2LQ9H0V9 348 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 ETNK1Q9HBU6 452 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 POPDC2Q9HBU9 364 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 MRPL47Q9HD33 250 aaKnown RBP12.1□□□□□ -0.47
SRRT-216ENST00000618262 KIF17Q9P2E2 1029 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 ZNF69Q9UC07 566 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 TMEM59LQ9UK28 342 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 MAPRE3Q9UPY8 281 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 MTCH2Q9Y6C9 303 aa12.1□□□□□ -0.47
SRRT-216ENST00000618262 A6NL46 340 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 TRIM77I1YAP6 450 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 SLC9A3R1O14745 358 aaPredicted RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 FSCN2O14926 492 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 SLC7A4O43246 635 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 GNG2P59768 71 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 S100A12P80511 92 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 ZXDBP98169 803 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 ASPHQ12797 758 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 MAPKAPK3Q16644 382 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 RAB41Q5JT25 222 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 PRPF38BQ5VTL8 546 aaKnown RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 TMEM150AQ86TG1 271 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 PGBD3Q8N328 593 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 HES6Q96HZ4 224 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 PEBP4Q96S96 227 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 ELAC2Q9BQ52 826 aaKnown RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 CNOT10Q9H9A5 744 aaKnown RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 GIMAP2Q9UG22 337 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 RPL26L1Q9UNX3 145 aaKnown RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 UTP11Q9Y3A2 253 aaKnown RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 TCRBV5S1A1TA0A578 114 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 C2CD4BA6NLJ0 364 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 KCNK3O14649 394 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 RIPK2O43353 540 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 TBX10O75333 385 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 LRCH4O75427 683 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 RPS2P15880 293 aaKnown RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 GM2AP17900 193 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 MIPP30301 263 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 GALNSP34059 522 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 ST13P50502 369 aaKnown RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 UBE3AQ05086 875 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 CA9Q16790 459 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 KLHDC10Q6PID8 442 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 RBM44Q6ZP01 1051 aaKnown RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 AGGF1Q8N302 714 aaeCLIP12.09□□□□□ -0.47
SRRT-216ENST00000618262 MREGQ8N565 214 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 CDX2Q99626 313 aaPredicted RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 CINPQ9BW66 212 aaPredicted RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 TRIM15Q9C019 465 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 ASAH2Q9NR71 780 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 SAE1Q9UBE0 346 aaPredicted RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 CPNE7Q9UBL6 633 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 MTF2Q9Y483 593 aaPredicted RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 IRAK3Q9Y616 596 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 RAB19A4D1S5 217 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 I6L893 689 aaPredicted RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 RGS13O14921 159 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 COCHO43405 550 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 BRINP1O60477 761 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 ALX3O95076 343 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 TRUB2O95900 331 aaKnown RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 GABRB2P47870 512 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 TFF2Q03403 129 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 MMRN1Q13201 1228 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 ERMARDQ5T6L9 678 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms