RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 IL21RQ9HBE5 538 aa10.92□□□□□ -0.66
POLR2A-209ENST00000617998 PIH1D1Q9NWS0 290 aaKnown RBP10.92□□□□□ -0.66
POLR2A-209ENST00000617998 CXXC1Q9P0U4 656 aaPredicted RBP10.92□□□□□ -0.66
POLR2A-209ENST00000617998 GRID1Q9ULK0 1009 aa10.92□□□□□ -0.66
POLR2A-209ENST00000617998 NWD2Q9ULI1 1742 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 PSMD4P55036 377 aaKnown RBP10.91□□□□□ -0.66
POLR2A-209ENST00000617998 FAM214AQ32MH5 1076 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 LRRC74BQ6ZQY2 392 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 PSTKQ8IV42 348 aaKnown RBP10.91□□□□□ -0.66
POLR2A-209ENST00000617998 RAD51AP1Q96B01 352 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 OR2M4Q96R27 311 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 KCNK12Q9HB15 430 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 NEK6Q9HC98 313 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 BLOC1S4Q9NUP1 217 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 LRCH4O75427 683 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 VIPR1P32241 457 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 SELENOVP59797 346 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 MYLK3Q32MK0 819 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 PCID2Q5JVF3 399 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 GATAD2AQ86YP4 633 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 THUMPD3Q9BV44 507 aaKnown RBP10.91□□□□□ -0.66
POLR2A-209ENST00000617998 ADAM33Q9BZ11 813 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 CAPN7Q9Y6W3 813 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 MON2Q7Z3U7 1717 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 KMOO15229 486 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 SEC22BO75396 215 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 CD38P28907 300 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 CLCNKAP51800 687 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 ZNF155Q12901 538 aaPredicted RBP10.91□□□□□ -0.66
POLR2A-209ENST00000617998 PWP1Q13610 501 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 UPP1Q16831 310 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 POMZP3Q6PJE2 187 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 TAS1R3Q7RTX0 852 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 GSPT2Q8IYD1 628 aaKnown RBP10.91□□□□□ -0.66
POLR2A-209ENST00000617998 KLHDC9Q8NEP7 349 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 OR6C4Q8NGE1 309 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 FNIP2Q9P278 1114 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 TNPO3Q9Y5L0 923 aaKnown RBP10.91□□□□□ -0.66
POLR2A-209ENST00000617998 AFF3P51826 1226 aaKnown RBP10.91□□□□□ -0.66
POLR2A-209ENST00000617998 CCNHP51946 323 aaPredicted RBP10.91□□□□□ -0.66
POLR2A-209ENST00000617998 ELAVL3Q14576 367 aaKnown RBP10.91□□□□□ -0.66
POLR2A-209ENST00000617998 TSNAXIP1Q2TAA8 658 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 ADHFE1Q8IWW8 467 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 GALNT15Q8N3T1 639 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 ACTL9Q8TC94 416 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 Q9H521 79 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 C16orf96A6NNT2 1141 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 CASP9P55211 416 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 ZNF33AQ06730 810 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 C22orf39Q6P5X5 142 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 MFSD6LQ8IWD5 586 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 TNIP2Q8NFZ5 429 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 OR56A4Q8NGH8 313 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 TMCC3Q9ULS5 477 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 CDYLQ9Y232 598 aa10.91□□□□□ -0.66
POLR2A-209ENST00000617998 MAOBP27338 520 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 MRPS25P82663 173 aaKnown RBP10.9□□□□□ -0.66
POLR2A-209ENST00000617998 PRAMEF14Q5SWL7 426 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 KIAA1161Q6NSJ0 714 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 NEPROQ6NW34 567 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 HORMAD1Q86X24 394 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 SYT12Q8IV01 421 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 TCEAL8Q8IYN2 117 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 STARD8Q92502 1023 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 CLP1Q92989 425 aaKnown RBP10.9□□□□□ -0.66
POLR2A-209ENST00000617998 CASD1Q96PB1 797 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 TAPBPLQ9BX59 468 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 CCDC177Q9NQR7 707 aaPredicted RBP10.9□□□□□ -0.66
POLR2A-209ENST00000617998 ANKRD6Q9Y2G4 727 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 OR1F1O43749 312 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 SRPRAP08240 638 aaKnown RBP10.9□□□□□ -0.66
POLR2A-209ENST00000617998 FGFR3P22607 806 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 NDST2P52849 883 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 DUSP6Q16828 381 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 DEFB133Q30KQ1 61 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 C3orf38Q5JPI3 329 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 RHBDF2Q6PJF5 856 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 C15orf39Q6ZRI6 1047 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 TC2NQ8N9U0 490 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 SELENOMQ8WWX9 145 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 RIOK2Q9BVS4 552 aaKnown RBP10.9□□□□□ -0.66
POLR2A-209ENST00000617998 MINDY3Q9H8M7 445 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 COL3A1P02461 1466 aaPredicted RBP10.9□□□□□ -0.66
POLR2A-209ENST00000617998 COCHO43405 550 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 PEX14O75381 377 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 WDR47O94967 919 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 NDST3O95803 873 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 HNRNPA2B1P22626 353 aaKnown RBP10.9□□□□□ -0.66
POLR2A-209ENST00000617998 MGAT1P26572 445 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 MAD2L1Q13257 205 aaPredicted RBP10.9□□□□□ -0.66
POLR2A-209ENST00000617998 KCTD16Q68DU8 428 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 DCP2Q8IU60 420 aaKnown RBP10.9□□□□□ -0.66
POLR2A-209ENST00000617998 SLC22A9Q8IVM8 553 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 PLA2G15Q8NCC3 412 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 SERPINB12Q96P63 405 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 HRASLS2Q9NWW9 162 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 ILVBLA1L0T0 632 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 TULP3O75386 442 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 POU5F1Q01860 360 aaKnown RBP10.9□□□□□ -0.66
POLR2A-209ENST00000617998 CLLU1OSQ5K130 101 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms