RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 ITM2BQ9Y287 266 aa16.28■□□□□ 0.2
SNAP47-213ENST00000617596 A0A1W2PQF6 199 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 CAPN8A6NHC0 703 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 C19orf67A6NJJ6 358 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 SPAG6O75602 509 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 HOXB2P14652 356 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 TSHRP16473 764 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 CCND1P24385 295 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 HPDP32754 393 aaPredicted RBP16.27■□□□□ 0.2
SNAP47-213ENST00000617596 STX2P32856 288 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 GCKP35557 465 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 E2F5Q15329 346 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 TAF1AQ15573 450 aaPredicted RBP16.27■□□□□ 0.2
SNAP47-213ENST00000617596 CDKN3Q16667 212 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 SPRED3Q2MJR0 410 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 BRAT1Q6PJG6 821 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 TTC30BQ8N4P2 665 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 PPM1NQ8N819 430 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 PTCD2Q8WV60 388 aaKnown RBP16.27■□□□□ 0.2
SNAP47-213ENST00000617596 HDAC10Q969S8 669 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 SCRN2Q96FV2 425 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 LRIG1Q96JA1 1093 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 MKRN2Q9H000 416 aaKnown RBP16.27■□□□□ 0.2
SNAP47-213ENST00000617596 MRM3Q9HC36 420 aaKnown RBP16.27■□□□□ 0.2
SNAP47-213ENST00000617596 MAGEE1Q9HCI5 957 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 B4GALT6Q9UBX8 382 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 GGT7Q9UJ14 662 aa16.27■□□□□ 0.2
SNAP47-213ENST00000617596 SMNDC1O75940 238 aaKnown RBP eCLIP16.27■□□□□ 0.19
SNAP47-213ENST00000617596 CRTAMO95727 393 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 LHCGRP22888 699 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 ARCN1P48444 511 aaKnown RBP16.27■□□□□ 0.19
SNAP47-213ENST00000617596 ZNF140P52738 457 aaPredicted RBP16.27■□□□□ 0.19
SNAP47-213ENST00000617596 CAMK2GQ13555 558 aaPredicted RBP16.27■□□□□ 0.19
SNAP47-213ENST00000617596 STAT4Q14765 748 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 RBBP5Q15291 538 aaKnown RBP16.27■□□□□ 0.19
SNAP47-213ENST00000617596 CMPK2Q5EBM0 449 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 LRRC66Q68CR7 880 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 SDE2Q6IQ49 451 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 CRTC1Q6UUV9 634 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 ZNF852Q6ZMS4 543 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 KCNMB4Q86W47 210 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 RASSF3Q86WH2 238 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 SIX5Q8N196 739 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 GBP7Q8N8V2 638 aaPredicted RBP16.27■□□□□ 0.19
SNAP47-213ENST00000617596 TMIEQ8NEW7 156 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 NECAB3Q96P71 396 aaPredicted RBP16.27■□□□□ 0.19
SNAP47-213ENST00000617596 CYTH2Q99418 400 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 FOXQ1Q9C009 403 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 ZFYVE1Q9HBF4 777 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 PCDH12Q9NPG4 1184 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 MUTYHQ9UIF7 546 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 PSAT1Q9Y617 370 aa16.27■□□□□ 0.19
SNAP47-213ENST00000617596 FAM159BA6NKW6 160 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 C2orf81A6NN90 581 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 RASGRF2O14827 1237 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 GSTA2P09210 222 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 PRSS56P0CW18 603 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 TARSP26639 723 aaKnown RBP16.26■□□□□ 0.19
SNAP47-213ENST00000617596 COPAP53621 1224 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 USP45Q70EL2 814 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 PTAR1Q7Z6K3 402 aaPredicted RBP16.26■□□□□ 0.19
SNAP47-213ENST00000617596 TEX9Q8N6V9 391 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 FLCNQ8NFG4 579 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 OR6P1Q8NGX9 317 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 ZNF317Q96PQ6 595 aaPredicted RBP16.26■□□□□ 0.19
SNAP47-213ENST00000617596 PAFAH2Q99487 392 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 GABRG3Q99928 467 aa16.26■□□□□ 0.19
SNAP47-213ENST00000617596 IARS2Q9NSE4 1012 aaKnown RBP16.26■□□□□ 0.19
SNAP47-213ENST00000617596 TSPAN11A1L157 253 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 UPK3BL1B0FP48 263 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 UPK3BL2E5RIL1 263 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 MAN2B1O00754 1011 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 MID1O15344 667 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 GPR39O43194 453 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 LPOP22079 712 aaPredicted RBP16.25■□□□□ 0.19
SNAP47-213ENST00000617596 XPAP23025 273 aaPredicted RBP16.25■□□□□ 0.19
SNAP47-213ENST00000617596 ABCG1P45844 678 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 POLR2LP62875 67 aaKnown RBP16.25■□□□□ 0.19
SNAP47-213ENST00000617596 UBXN2BQ14CS0 331 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 CAPRIN2Q6IMN6 1127 aaKnown RBP16.25■□□□□ 0.19
SNAP47-213ENST00000617596 TMEM92Q6UXU6 159 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 RFLNAQ6ZTI6 216 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 LDB1Q86U70 411 aaPredicted RBP16.25■□□□□ 0.19
SNAP47-213ENST00000617596 DENND6AQ8IWF6 608 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 CYP4X1Q8N118 509 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 ASB2Q96Q27 587 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 MCCC1Q96RQ3 725 aaPredicted RBP16.25■□□□□ 0.19
SNAP47-213ENST00000617596 CCDC77Q9BR77 488 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 RSPH9Q9H1X1 276 aaPredicted RBP16.25■□□□□ 0.19
SNAP47-213ENST00000617596 SLC24A3Q9HC58 644 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 ETAA1Q9NY74 926 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 ZFATQ9P243 1243 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 FKBPLQ9UIM3 349 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 PPIL1Q9Y3C6 166 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 NPC1O15118 1278 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 STX7O15400 261 aaKnown RBP16.25■□□□□ 0.19
SNAP47-213ENST00000617596 AHCYL1O43865 530 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 WFS1O76024 890 aa16.25■□□□□ 0.19
SNAP47-213ENST00000617596 PAPSS2O95340 614 aaPredicted RBP16.25■□□□□ 0.19
SNAP47-213ENST00000617596 FESP07332 822 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms