RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 B4DGG1 531 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 PRLP01236 227 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 TRBC1P01850 177 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 HLA-DQB2P05538 268 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 TPM3P06753 285 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 TMEM253P0C7T8 217 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 CCNCP24863 283 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 MAN1A1P33908 653 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 ITKQ08881 620 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 NIPAL4Q0D2K0 466 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 HLTFQ14527 1009 aaKnown RBP eCLIP22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 IFI16Q16666 785 aaKnown RBP22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 C14orf28Q4W4Y0 310 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 LRRC66Q68CR7 880 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 TIGD7Q6NT04 549 aaPredicted RBP22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 GPBAR1Q8TDU6 330 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 GFM1Q96RP9 751 aaKnown RBP22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 CHP1Q99653 195 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 TDRD1Q9BXT4 1180 aaKnown RBP22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 FOXP3Q9BZS1 431 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 SUDS3Q9H7L9 328 aaPredicted RBP22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 SPATS2LQ9NUQ6 558 aaKnown RBP22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 RBM22Q9NW64 420 aaKnown RBP eCLIP22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 KCTD5Q9NXV2 234 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 DTLQ9NZJ0 730 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 CD84Q9UIB8 345 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 APPL1Q9UKG1 709 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 RNF215Q9Y6U7 377 aa22.18■■□□□ 1.14
NEDD4L-237ENST00000617539 CCDC187A0A096LP49 1063 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 PDE2AO00408 941 aaPredicted RBP22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 KRT7P08729 469 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 CCNB1P14635 433 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 GLB1P16278 677 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 PTMSP20962 102 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 NFKBIAP25963 317 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 TEAD1P28347 426 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 POLD2P49005 469 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 PTSQ03393 145 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 DPTQ07507 201 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 TRIM14Q14142 442 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 ARHGEF7Q14155 803 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 RAET1GQ6H3X3 334 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 FOXR1Q6PIV2 292 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 CCNJLQ8IV13 435 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 OR6C4Q8NGE1 309 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 WDR36Q8NI36 951 aaKnown RBP22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 LIN37Q96GY3 246 aaPredicted RBP22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 UBL7Q96S82 380 aaPredicted RBP22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 ABCG8Q9H221 673 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 LRRN3Q9H3W5 708 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 DPEP2Q9H4A9 486 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 ABHD10Q9NUJ1 306 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 SPTLC3Q9NUV7 552 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 SUFUQ9UMX1 484 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 CHKBQ9Y259 395 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 SLC17A4Q9Y2C5 497 aa22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 ZFC3H1O60293 1989 aaKnown RBP22.17■■□□□ 1.14
NEDD4L-237ENST00000617539 GOLGA6CA6NDK9 693 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 GOLGA6BA6NDN3 693 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 C3orf70A6NLC5 250 aaPredicted RBP22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 GOLGA6DP0CG33 693 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 KDELR1P24390 212 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 RBMS1P29558 406 aaKnown RBP22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 MESDQ14696 234 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 TSR1Q2NL82 804 aaKnown RBP22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 SPRED1Q7Z699 444 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 CLEC14AQ86T13 490 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 C17orf82Q86X59 251 aaPredicted RBP22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 VSTM4Q8IW00 320 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 MAP7D3Q8IWC1 876 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 Q8N9G6 341 aaPredicted RBP22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 SLC35G2Q8TBE7 412 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 KCNE4Q8WWG9 221 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 SCAMP4Q969E2 229 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 HDAC11Q96DB2 347 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 RNF157Q96PX1 679 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 GOLGA6AQ9NYA3 693 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 AMACRQ9UHK6 382 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 ATXN7L1Q9ULK2 861 aaPredicted RBP22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 SSUH2Q9Y2M2 353 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 TTLL3Q9Y4R7 772 aa22.16■■□□□ 1.14
NEDD4L-237ENST00000617539 CAPN8A6NHC0 703 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 CBFA2T2O43439 604 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 TNFSF15O95150 251 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 FGF1P05230 155 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 MMP2P08253 660 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 PNLIPP16233 465 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 AK4P27144 223 aaPredicted RBP22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 GNPDA1P46926 289 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 STC1P52823 247 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 MAZP56270 477 aaKnown RBP22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 CXADRP78310 365 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 FAM182AQ5T1J6 154 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 TMPRSS9Q7Z410 1059 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 PLD5Q8N7P1 536 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 AGAP2Q99490 1192 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 DEF6Q9H4E7 631 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 CPNE5Q9HCH3 593 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 EPB41L5Q9HCM4 733 aa22.15■■□□□ 1.14
NEDD4L-237ENST00000617539 TRNAU1APQ9NX07 287 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms