RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 WISP3O95389 354 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 STAMBPO95630 424 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 LINC00032P0C843 101 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 HSPA8P11142 646 aaKnown RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 ATP6V1B2P21281 511 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 SOX11P35716 441 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 NDST2P52849 883 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 SH3BGRP55822 239 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 USP46P62068 366 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 TIAL1Q01085 375 aaKnown RBP eCLIP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 PRKCQQ04759 706 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 GALNT3Q14435 633 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 SEMA3AQ14563 771 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 USP41Q3LFD5 358 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 C8orf82Q6P1X6 216 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 SPPL2CQ8IUH8 684 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 PCYOX1LQ8NBM8 494 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 ARRDC2Q8TBH0 407 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 TRPC4APQ8TEL6 797 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 BTRCQ9Y297 605 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 Q9Y3F1 56 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 A0A0U1RQF3 1178 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 A0A1B0GTL3 188 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 FAM149AA5PLN7 773 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 WASH4PA8MWX3 477 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 H3BMM5 538 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 NME4O00746 187 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 CD3EAPO15446 510 aaKnown RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 HTRA2O43464 458 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 TPST1O60507 370 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 H6PDO95479 791 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 GLP2RO95838 553 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 ATXN1LP0C7T5 689 aaKnown RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 RHOQP17081 205 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 UGT1A6P19224 532 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 CHRM3P20309 590 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 TXNL4AP83876 142 aaKnown RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 RAP1GAP2Q684P5 730 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 MON1AQ86VX9 555 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 CARM1Q86X55 608 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 ZNF683Q8IZ20 524 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 OR13C4Q8NGS5 318 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 OR2T34Q8NGX1 318 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 OR2T3Q8NH03 318 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 TWIST2Q8WVJ9 160 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 CCDC97Q96F63 343 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 SLC39A13Q96H72 371 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 SUSD3Q96L08 255 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 SEMA3CQ99985 751 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 MTG1Q9BT17 334 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 UPF3AQ9H1J1 476 aaKnown RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 PRDM5Q9NQX1 630 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-215ENST00000617482 OLAHQ9NV23 265 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 GMIPQ9P107 970 aa11.79□□□□□ -0.52
C11orf54-215ENST00000617482 SCN4AP35499 1836 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 ARHGAP10A1A4S6 786 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 CCDC162PA2VCL2 907 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 PDLIM1O00151 329 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 ZNF623O75123 536 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 GFAPP14136 432 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 CAPN3P20807 821 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 SLC5A2P31639 672 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 ACVRL1P37023 503 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 ACADVLP49748 655 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 CDH15P55291 814 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 ECT2LQ008S8 904 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 PLOD1Q02809 727 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-215ENST00000617482 FBXL22Q6P050 247 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 SERINC5Q86VE9 423 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 B4GALNT2Q8NHY0 566 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 RIN3Q8TB24 985 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 TUBGCP3Q96CW5 907 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.78□□□□□ -0.52
C11orf54-215ENST00000617482 CEPT1Q9Y6K0 416 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 LOC285095A0A1B0GVY8 99 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 H0YJX3 145 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 AZIN1O14977 448 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 MUSKO15146 869 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 B4GALT3O60512 393 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 CELF2O95319 508 aaKnown RBP11.78□□□□□ -0.52
C11orf54-215ENST00000617482 MTHFD2P13995 350 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 CDH2P19022 906 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-215ENST00000617482 FDXRP22570 491 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 NRG1Q02297 640 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-215ENST00000617482 CREB5Q02930 508 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 MGAT3Q09327 533 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 POLD3Q15054 466 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-215ENST00000617482 RPS6KA2Q15349 733 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 TBCELQ5QJ74 424 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 MSANTD2Q6P1R3 559 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 HACD2Q6Y1H2 254 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 GALNT7Q86SF2 657 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 NUP93Q8N1F7 819 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 MIER2Q8N344 545 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 TRPV1Q8NER1 839 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 EZH1Q92800 747 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-215ENST00000617482 ROPN1LQ96C74 230 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 UHRF1Q96T88 793 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-215ENST00000617482 TUBB1Q9H4B7 451 aa11.78□□□□□ -0.52
C11orf54-215ENST00000617482 TMEM248Q9NWD8 314 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms