RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 HKDC1Q2TB90 917 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 CCDC36Q8IYA8 594 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 ZNF781Q8N8C0 355 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 C18orf25Q96B23 403 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 DIRAS2Q96HU8 199 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 ACO2Q99798 780 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 CDT1Q9H211 546 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 KAT8Q9H7Z6 458 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 NKX1-2Q9UD57 310 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 FAM92AA1XBS5 289 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 SLC22A2O15244 555 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 HOXA2O43364 376 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 NDUFS2O75306 463 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 EPORP19235 508 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 SLC6A2P23975 617 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 TNFSF9P41273 254 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 POU5F1Q01860 360 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 THOC7Q6I9Y2 204 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 STRADAQ7RTN6 431 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 PEG10Q86TG7 708 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 RALGPS2Q86X27 583 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 PGBD3Q8N328 593 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 RAET1EQ8TD07 263 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 PHF12Q96QT6 1004 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 CIPCQ9C0C6 399 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 CD320Q9NPF0 282 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 PDP1Q9P0J1 537 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 RCOR3Q9P2K3 495 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 PFDN2Q9UHV9 154 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 LRRC42Q9Y546 428 aa10.66□□□□□ -0.7
CLTCL1-209ENST00000617103 ELOVL7A1L3X0 281 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 RPN2P04844 631 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 AIF1P55008 147 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 RPL26P61254 145 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 SEMA5AQ13591 1074 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 C6orf89Q6UWU4 347 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 MEIOBQ8N635 442 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 SLC4A11Q8NBS3 891 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 OR8H1Q8NGG4 311 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 OR4L1Q8NH43 312 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 DNAJB3Q8WWF6 145 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 AKAP7Q9P0M2 348 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 MT-ND1P03886 318 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 BMP7P18075 431 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 SDC2P34741 201 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 SLC18A1P54219 525 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 PRKAG1P54619 331 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 POLR2LP62875 67 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 CCDC157Q569K6 752 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 ANXA8L1Q5VT79 327 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 APOBEC3HQ6NTF7 200 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 ERICH5Q6P6B1 374 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 KLHDC10Q6PID8 442 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 FRMD7Q6ZUT3 714 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 AHSA2Q719I0 299 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 ELMO1Q92556 727 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 PIK3R3Q92569 461 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 PPP1R14AQ96A00 147 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 B3GALT6Q96L58 329 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 CSPG4P5Q96PW8 444 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 PSME2Q9UL46 239 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 IRAK3Q9Y616 596 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 MEGF6O75095 1541 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 ARHGEF33A8MVX0 844 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 KPNA5O15131 536 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 SERPINB7O75635 380 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 LYPLA2O95372 231 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 FGF1P05230 155 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 FGRP09769 529 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 SERPINA4P29622 427 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 CDK18Q07002 472 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 CAPSQ13938 189 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 SKIV2LQ15477 1246 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 ASTE1Q2TB18 679 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 TEX44Q53QW1 395 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 WSCD1Q658N2 575 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 BHLHB9Q6PI77 547 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 TEX47Q8TBZ9 253 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 TMCO6Q96DC7 493 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 LINGO1Q96FE5 620 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 FNDC11Q9BVV2 318 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 ZYG11BQ9C0D3 744 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 SDCBP2Q9H190 292 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 IKZF4Q9H2S9 585 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 SNX7Q9UNH6 387 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 PCDHGA10Q9Y5H3 936 aa10.65□□□□□ -0.7
CLTCL1-209ENST00000617103 CASZ1Q86V15 1759 aa10.65□□□□□ -0.71
CLTCL1-209ENST00000617103 AGRPO00253 132 aa10.64□□□□□ -0.71
CLTCL1-209ENST00000617103 STK25O00506 426 aa10.64□□□□□ -0.71
CLTCL1-209ENST00000617103 NR2F1P10589 423 aa10.64□□□□□ -0.71
CLTCL1-209ENST00000617103 LPOP22079 712 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-209ENST00000617103 EPHB3P54753 998 aa10.64□□□□□ -0.71
CLTCL1-209ENST00000617103 PTPN5P54829 565 aa10.64□□□□□ -0.71
CLTCL1-209ENST00000617103 NRG1Q02297 640 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-209ENST00000617103 GBE1Q04446 702 aa10.64□□□□□ -0.71
CLTCL1-209ENST00000617103 TMPRSS11AQ6ZMR5 421 aa10.64□□□□□ -0.71
CLTCL1-209ENST00000617103 SLC26A9Q7LBE3 791 aa10.64□□□□□ -0.71
CLTCL1-209ENST00000617103 R3HCC1LQ7Z5L2 792 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms