RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 C3orf30Q96M34 536 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 NSUN5Q96P11 429 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 NR1H4Q96RI1 486 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 KCNA7Q96RP8 456 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 POLR1EQ9GZS1 481 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 PSMD13Q9UNM6 376 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 WDR37Q9Y2I8 494 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 WASH4PA8MWX3 477 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 E7ENX8 843 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 FMO4P31512 558 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 PSME3P61289 254 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 RPS24P62847 133 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 SREBF2Q12772 1141 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 KIF19Q2TAC6 998 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 CCDC92Q53HC0 331 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 CWF19L1Q69YN2 538 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 ZNF549Q6P9A3 640 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 TAS1R1Q7RTX1 841 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 ADGRG6Q86SQ4 1221 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 SETD3Q86TU7 594 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 DDIASQ8IXT1 998 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 PTGR2Q8N8N7 351 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 NAT14Q8WUY8 206 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 DCUN1D1Q96GG9 259 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 FUBP3Q96I24 572 aaKnown RBP eCLIP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 MPP4Q96JB8 637 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 UBXN10Q96LJ8 280 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 KLHL32Q96NJ5 620 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 ATP13A1Q9HD20 1204 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 GMPR2Q9P2T1 348 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 PCDHGB4Q9UN71 923 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 PCDHGB5Q9Y5G0 923 aa13.89□□□□□ -0.19
CACNA1C-231ENST00000616390 MROH6A6NGR9 719 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 FAM155AB1AL88 458 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 SLC7A4O43246 635 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 AHCYL1O43865 530 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 TSPAN3O60637 253 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 CSPG5O95196 566 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 EOMESO95936 686 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 IRF1P10914 325 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 FGFR3P22607 806 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 DNAJB13P59910 316 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 GSTA3Q16772 222 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 MAP3K21Q5TCX8 1036 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 TMEM173Q86WV6 379 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 ARHGAP18Q8N392 663 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 AFAP1L2Q8N4X5 818 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 SMYD1Q8NB12 490 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 HMGCLL1Q8TB92 370 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 ATP6V1E2Q96A05 226 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 MFSD1Q9H3U5 465 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 GSTO2Q9H4Y5 243 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 MID1IP1Q9NPA3 183 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 MTMR11A4FU01 709 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 GFAPP14136 432 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 TACR2P21452 398 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 RGRP47804 291 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 CDKN1CP49918 316 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 HK2P52789 917 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 FOXA1P55317 472 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 IL10RBQ08334 325 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 C16orf59Q7L2K0 433 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 DENND1CQ8IV53 801 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 LILRA2Q8N149 483 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 ESAMQ96AP7 390 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 CNBD2Q96M20 576 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 PKP2Q99959 881 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 BPIFA1Q9NP55 256 aa13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 ZFP37Q9Y6Q3 630 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-231ENST00000616390 F5H5T6 163 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 ALDH2P05091 517 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 FESP07332 822 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 SLC6A4P31645 630 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 SH3BP2P78314 561 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 ECT2LQ008S8 904 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 NRG1Q02297 640 aaPredicted RBP13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 PDK3Q15120 406 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 ZNF678Q5SXM1 525 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 TRPC4APQ8TEL6 797 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 CCDC126Q96EE4 140 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 VMP1Q96GC9 406 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 ZNF512Q96ME7 567 aaPredicted RBP13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 BTRCQ9Y297 605 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 H3BMM5 538 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 FBP2O00757 339 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 GJB5O95377 273 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 PGM3O95394 542 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 RPLP2P05387 115 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 SERPINF2P08697 491 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 IMPDH1P20839 514 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 GK3PQ14409 553 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 OR4D1Q15615 310 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 UNC50Q53HI1 259 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 REP15Q6BDI9 236 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 PELI3Q8N2H9 469 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 DBF4BQ8NFT6 615 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 OR4L1Q8NH43 312 aa13.87□□□□□ -0.19
CACNA1C-231ENST00000616390 MAELQ96JY0 434 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms