RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 GOLGA6CA6NDK9 693 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 GOLGA6BA6NDN3 693 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 J3QKU1 62 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 B4GAT1O43505 415 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 FGF1P05230 155 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 GOLGA6DP0CG33 693 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 KRT10P13645 584 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 AK4P27144 223 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 GNPDA1P46926 289 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 ILF3Q12906 894 aaKnown RBP eCLIP20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 MAP9Q49MG5 647 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 PHF19Q5T6S3 580 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 RAET1GQ6H3X3 334 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 Q6ZVL8 140 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 TSPAN33Q86UF1 283 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 BBS5Q8N3I7 341 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 CMKLR1Q99788 373 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 GSDMCQ9BYG8 508 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 RDH14Q9HBH5 336 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 PCDH18Q9HCL0 1135 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 KCTD5Q9NXV2 234 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 GOLGA6AQ9NYA3 693 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 FOXJ2Q9P0K8 574 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 TAAR2Q9P1P5 351 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 ST14Q9Y5Y6 855 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 BSNQ9UPA5 3926 aa20.75■□□□□ 0.91
TRAPPC3-208ENST00000616074 B8ZZF3 427 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 PSMD11O00231 422 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 PGLSO95336 258 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 NFKBIAP25963 317 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 MMP13P45452 471 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 MAPK10P53779 464 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 CDH6P55285 790 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 OR1D5P58170 312 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 C16orf72Q14CZ0 275 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 AMZ1Q400G9 498 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 RALGPS1Q5JS13 557 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 MARC1Q5VT66 337 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 ZNF438Q7Z4V0 828 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 NSMCE1Q8WV22 266 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 USP7Q93009 1102 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 SCRN2Q96FV2 425 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 BTBD6Q96KE9 485 aa20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 MCCC1Q96RQ3 725 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 TRNAU1APQ9NX07 287 aaKnown RBP20.74■□□□□ 0.91
TRAPPC3-208ENST00000616074 A0A0U1RQS6 177 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 C9orf172C9J069 976 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 ECEL1O95672 775 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 CPNE6O95741 557 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 CTPS1P17812 591 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 TEAD1P28347 426 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 SERPINB6P35237 376 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 POLD2P49005 469 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 SLC25A11Q02978 314 aaKnown RBP20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 PIGHQ14442 188 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 NR1D2Q14995 579 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 ARMC12Q5T9G4 340 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 HGSNATQ68CP4 663 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 SLC30A9Q6PML9 568 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 PIM3Q86V86 326 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 ZFAND4Q86XD8 727 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 TEKT4Q8WW24 435 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 PIH1D2Q8WWB5 315 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 PATE1Q8WXA2 126 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 THAP2Q9H0W7 228 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 CD84Q9UIB8 345 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 SLC17A4Q9Y2C5 497 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 PPIL1Q9Y3C6 166 aa20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 ZFC3H1O60293 1989 aaKnown RBP20.73■□□□□ 0.91
TRAPPC3-208ENST00000616074 RHPN2P1A8MT19 583 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 PDHA1P08559 390 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 ALDH4A1P30038 563 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 CTBSQ01459 385 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 NR1I3Q14994 352 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 TDRD12Q587J7 1177 aaKnown RBP20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 DOK6Q6PKX4 331 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 RFLNAQ6ZTI6 216 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 USP53Q70EK8 1073 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 USP45Q70EL2 814 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 TECPR1Q7Z6L1 1165 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 NAGSQ8N159 534 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 NIPA2Q8N8Q9 360 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 SGF29Q96ES7 293 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 SMIM14Q96QK8 99 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 NUDT22Q9BRQ3 303 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 NT5MQ9NPB1 228 aa20.72■□□□□ 0.91
TRAPPC3-208ENST00000616074 FZD6O60353 706 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 SOD1P00441 154 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 IVLP07476 585 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 IL4RP24394 825 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 ADCY8P40145 1251 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 ZNF165P49910 485 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 DPTQ07507 201 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 KRT81Q14533 505 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 LINC00303Q3SY05 128 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 FIGNQ5HY92 759 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 ZNF574Q6ZN55 896 aaPredicted RBP20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 VASH2Q86V25 355 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 TEX26Q8N6G2 289 aa20.71■□□□□ 0.91
TRAPPC3-208ENST00000616074 EXD3Q8N9H8 876 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms