RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 RIN3Q8TB24 985 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 AGR3Q8TD06 166 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 DDI1Q8WTU0 396 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 PDCD6IPQ8WUM4 868 aaKnown RBP19.13■□□□□ 0.65
MMP28-204ENST00000615136 FAM136AQ96C01 138 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 OR52B2Q96RD2 323 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 MAN1C1Q9NR34 630 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 DNMT3BQ9UBC3 853 aaKnown RBP19.13■□□□□ 0.65
MMP28-204ENST00000615136 CCL26Q9Y258 94 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 LRCH1Q9Y2L9 728 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 INSL6Q9Y581 213 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 CD3EAPO15446 510 aaKnown RBP19.13■□□□□ 0.65
MMP28-204ENST00000615136 FKBP6O75344 327 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 RFPL2O75678 378 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 ADH1AP07327 375 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 COX4I1P13073 169 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 ITGAXP20702 1163 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 SLC7A9P82251 487 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 TIAL1Q01085 375 aaKnown RBP eCLIP19.13■□□□□ 0.65
MMP28-204ENST00000615136 SLC14A2Q15849 920 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 RALGPS1Q5JS13 557 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 TMEM240Q5SV17 173 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 SEL1L3Q68CR1 1132 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 AAGABQ6PD74 315 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 NCEH1Q6PIU2 408 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 FRMD7Q6ZUT3 714 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 MFN1Q8IWA4 741 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 OR4K2Q8NGD2 314 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 TCEAL4Q96EI5 215 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 CDKN2AIPNLQ96HQ2 116 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 CNDP1Q96KN2 507 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 CARNS1A5YM72 827 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 NEMP2A6NFY4 417 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 SMAD6O43541 496 aaKnown RBP19.12■□□□□ 0.65
MMP28-204ENST00000615136 PIGNO95427 931 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 GLP2RO95838 553 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 SLC12A2P55011 1212 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 ARL13AQ5H913 290 aaPredicted RBP19.12■□□□□ 0.65
MMP28-204ENST00000615136 ZNF783Q6ZMS7 281 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 HTR3DQ70Z44 454 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 GLT6D1Q7Z4J2 308 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 OR6K2Q8NGY2 324 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 SHKBP1Q8TBC3 707 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 CDH22Q9UJ99 828 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 A0A087X1B8 175 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 SLCO1B7G3V0H7 640 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 MAP3K7O43318 606 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 WISP3O95389 354 aaPredicted RBP19.12■□□□□ 0.65
MMP28-204ENST00000615136 PRAMEF12O95522 483 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 EN2P19622 333 aaPredicted RBP19.12■□□□□ 0.65
MMP28-204ENST00000615136 CDKN1CP49918 316 aaPredicted RBP19.12■□□□□ 0.65
MMP28-204ENST00000615136 NAGLUP54802 743 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 FPGSQ05932 587 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 GALNT7Q86SF2 657 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 ADGRG6Q86SQ4 1221 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 OR4L1Q8NH43 312 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 RTKNQ9BST9 563 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 OSBPL1AQ9BXW6 950 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 SHCBP1LQ9BZQ2 653 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 TM6SF2Q9BZW4 377 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 NLE1Q9NVX2 485 aaPredicted RBP19.12■□□□□ 0.65
MMP28-204ENST00000615136 VTI1BQ9UEU0 232 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 ARHGAP26Q9UNA1 814 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 SSX2IPQ9Y2D8 614 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 VWA7Q9Y334 891 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 SH3BP1Q9Y3L3 701 aa19.12■□□□□ 0.65
MMP28-204ENST00000615136 MYOFQ9NZM1 2061 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 LEFTY2O00292 366 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 ARHGEF15O94989 841 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 CCDC166P0CW27 439 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 KCNA5P22460 613 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 RHOAP61586 193 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 NSUN2Q08J23 767 aaKnown RBP eCLIP19.11■□□□□ 0.65
MMP28-204ENST00000615136 ASPHQ12797 758 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 CCDC149Q6ZUS6 474 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 LSMEM2Q8N112 164 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 EFHBQ8N7U6 833 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 TXNDC5Q8NBS9 432 aaKnown RBP19.11■□□□□ 0.65
MMP28-204ENST00000615136 PEX13Q92968 403 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 TMEM106CQ9BVX2 250 aa19.11■□□□□ 0.65
MMP28-204ENST00000615136 MRPL46Q9H2W6 279 aaKnown RBP19.11■□□□□ 0.65
MMP28-204ENST00000615136 LSM7Q9UK45 103 aaKnown RBP19.11■□□□□ 0.65
MMP28-204ENST00000615136 TRAV19A0A0A6YYK7 116 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 TYW5A2RUC4 315 aaKnown RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 ANKRD66B4E2M5 251 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 SLC22A2O15244 555 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 GRID2O43424 1007 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 GLUD1P00367 558 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 GKP32189 559 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 CD70P32970 193 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 CTNNB1P35222 781 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 KPNA2P52292 529 aaKnown RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 MRPS35P82673 323 aaKnown RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 PPIGQ13427 754 aaKnown RBP eCLIP19.1■□□□□ 0.65
MMP28-204ENST00000615136 CUL3Q13618 768 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 INO80DQ53TQ3 878 aaPredicted RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 KBTBD2Q8IY47 623 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 GPR150Q8NGU9 434 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 JADE3Q92613 823 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 UBXN10Q96LJ8 280 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms