RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 CCDC13Q8IYE1 715 aa22.7■■□□□ 1.22
FAM228B-208ENST00000613899 RNF214Q8ND24 703 aa22.7■■□□□ 1.22
FAM228B-208ENST00000613899 CCNYQ8ND76 341 aa22.7■■□□□ 1.22
FAM228B-208ENST00000613899 FAM46DQ8NEK8 389 aa22.7■■□□□ 1.22
FAM228B-208ENST00000613899 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.7■■□□□ 1.22
FAM228B-208ENST00000613899 RAPGEF5Q92565 580 aa22.7■■□□□ 1.22
FAM228B-208ENST00000613899 RNF157Q96PX1 679 aa22.7■■□□□ 1.22
FAM228B-208ENST00000613899 LGMNQ99538 433 aa22.7■■□□□ 1.22
FAM228B-208ENST00000613899 CHP1Q99653 195 aa22.7■■□□□ 1.22
FAM228B-208ENST00000613899 CARS2Q9HA77 564 aaKnown RBP22.7■■□□□ 1.22
FAM228B-208ENST00000613899 DTLQ9NZJ0 730 aa22.7■■□□□ 1.22
FAM228B-208ENST00000613899 PCDHGA8Q9Y5G5 932 aa22.7■■□□□ 1.22
FAM228B-208ENST00000613899 HLA-DQB2P05538 268 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 PDX1P52945 283 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 CCDC173Q0VFZ6 552 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 OGFOD3Q6PK18 319 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 TECPR1Q7Z6L1 1165 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.69■■□□□ 1.22
FAM228B-208ENST00000613899 WDR36Q8NI36 951 aaKnown RBP22.69■■□□□ 1.22
FAM228B-208ENST00000613899 KIAA1524Q8TCG1 905 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 CRELD1Q96HD1 420 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 HIC2Q96JB3 615 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 GFM1Q96RP9 751 aaKnown RBP22.69■■□□□ 1.22
FAM228B-208ENST00000613899 GSDMCQ9BYG8 508 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 FRMD8Q9BZ67 464 aaPredicted RBP22.69■■□□□ 1.22
FAM228B-208ENST00000613899 ASCL3Q9NQ33 180 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 RABGEF1Q9UJ41 708 aa22.69■■□□□ 1.22
FAM228B-208ENST00000613899 ARHGEF17Q96PE2 2063 aaPredicted RBP22.69■■□□□ 1.22
FAM228B-208ENST00000613899 PTPRQQ9UMZ3 2332 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 CAPN8A6NHC0 703 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 B4DGG1 531 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 D6RAR5 112 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 PYGLP06737 847 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 GLB1P16278 677 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 RBMS1P29558 406 aaKnown RBP22.68■■□□□ 1.22
FAM228B-208ENST00000613899 GPR1P46091 355 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 RPL26P61254 145 aaKnown RBP22.68■■□□□ 1.22
FAM228B-208ENST00000613899 PPIDQ08752 370 aaKnown RBP22.68■■□□□ 1.22
FAM228B-208ENST00000613899 ILF3Q12906 894 aaKnown RBP eCLIP22.68■■□□□ 1.22
FAM228B-208ENST00000613899 SLC10A2Q12908 348 aaPredicted RBP22.68■■□□□ 1.22
FAM228B-208ENST00000613899 PTPRRQ15256 657 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 C14orf28Q4W4Y0 310 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 CERCAMQ5T4B2 595 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 ZNF765Q7L2R6 523 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 ARRDC2Q8TBH0 407 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 DPEP2Q9H4A9 486 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 TRNAU1APQ9NX07 287 aaKnown RBP22.68■■□□□ 1.22
FAM228B-208ENST00000613899 RPL26L1Q9UNX3 145 aaKnown RBP22.68■■□□□ 1.22
FAM228B-208ENST00000613899 CHKBQ9Y259 395 aa22.68■■□□□ 1.22
FAM228B-208ENST00000613899 CCDC187A0A096LP49 1063 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 TMX2-CTNND1H3BSU7 103 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 NOBOXO60393 691 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 RPLP0P05388 317 aaKnown RBP22.67■■□□□ 1.22
FAM228B-208ENST00000613899 CEACAM5P06731 702 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 PNLIPP16233 465 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 MLLT3P42568 568 aaPredicted RBP22.67■■□□□ 1.22
FAM228B-208ENST00000613899 ODF2Q5BJF6 829 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 LRRC38Q5VT99 294 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 CCNJLQ8IV13 435 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 SPACA3Q8IXA5 215 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 RAVER1Q8IY67 606 aaKnown RBP22.67■■□□□ 1.22
FAM228B-208ENST00000613899 PLD5Q8N7P1 536 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 CCL4L1Q8NHW4 92 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 GPBAR1Q8TDU6 330 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 AP2M1Q96CW1 435 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 LIN37Q96GY3 246 aaPredicted RBP22.67■■□□□ 1.22
FAM228B-208ENST00000613899 PCDH9Q9HC56 1237 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 APPL1Q9UKG1 709 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 INTUQ9ULD6 942 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 SLC17A4Q9Y2C5 497 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 IGSF10Q6WRI0 2623 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 KIF26BQ2KJY2 2108 aa22.67■■□□□ 1.22
FAM228B-208ENST00000613899 AKR1B15C9JRZ8 316 aaPredicted RBP22.66■■□□□ 1.22
FAM228B-208ENST00000613899 APOL1O14791 398 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 CASC3O15234 703 aaKnown RBP22.66■■□□□ 1.22
FAM228B-208ENST00000613899 KRT1P04264 644 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 SLC1A1P43005 524 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 GNPDA1P46926 289 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 STC1P52823 247 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 CCL7P80098 99 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 IFI35P80217 286 aaPredicted RBP22.66■■□□□ 1.22
FAM228B-208ENST00000613899 PTSQ03393 145 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 TLE3Q04726 772 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 PEX6Q13608 980 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 HLTFQ14527 1009 aaKnown RBP eCLIP22.66■■□□□ 1.22
FAM228B-208ENST00000613899 SLC9A4Q6AI14 798 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 ADAMTSL4Q6UY14 1074 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 NLRP8Q86W28 1048 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 ARL14Q8N4G2 192 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 LPCAT1Q8NF37 534 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 LRRN4Q8WUT4 740 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 SLC46A1Q96NT5 459 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 LYSMD1Q96S90 227 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 MAK16Q9BXY0 300 aaKnown RBP22.66■■□□□ 1.22
FAM228B-208ENST00000613899 ABCG8Q9H221 673 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 LRRN3Q9H3W5 708 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 PRORYQ9H606 182 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 SUDS3Q9H7L9 328 aaPredicted RBP22.66■■□□□ 1.22
FAM228B-208ENST00000613899 CD84Q9UIB8 345 aa22.66■■□□□ 1.22
FAM228B-208ENST00000613899 SUFUQ9UMX1 484 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms