RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 NAA30Q147X3 362 aaPredicted RBP14.68□□□□□ -0.06
CD48-203ENST00000613788 AGERQ15109 404 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 ELF2Q15723 593 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 TMEM259Q4ZIN3 620 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 HP1BP3Q5SSJ5 553 aaPredicted RBP14.68□□□□□ -0.06
CD48-203ENST00000613788 KIAA0895LQ68EN5 471 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 Q6ZVL8 140 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 CYP2U1Q7Z449 544 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 HSD11B1LQ7Z5J1 315 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 TECPR1Q7Z6L1 1165 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 TMEM135Q86UB9 458 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 RELL1Q8IUW5 271 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 PALM2Q8IXS6 379 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 AGGF1Q8N302 714 aaeCLIP14.68□□□□□ -0.06
CD48-203ENST00000613788 FAM160A2Q8N612 972 aaPredicted RBP14.68□□□□□ -0.06
CD48-203ENST00000613788 FRMD1Q8N878 549 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 FBXO36Q8NEA4 188 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 CADM4Q8NFZ8 388 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 ASB12Q8WXK4 309 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 SLC17A9Q9BYT1 436 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 BPIFA1Q9NP55 256 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 ZSCAN32Q9NX65 697 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 ZC3H7BQ9UGR2 993 aaKnown RBP14.68□□□□□ -0.06
CD48-203ENST00000613788 ZFR2Q9UPR6 939 aaKnown RBP14.68□□□□□ -0.06
CD48-203ENST00000613788 CHMP2BQ9UQN3 213 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 RPS6KL1Q9Y6S9 549 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
CD48-203ENST00000613788 RPP40O75818 363 aaKnown RBP14.67□□□□□ -0.06
CD48-203ENST00000613788 USP1O94782 785 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 SP9P0CG40 484 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 PSMA3P25788 255 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 NUDT1P36639 197 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 ETV3P41162 512 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 RPL6Q02878 288 aaKnown RBP14.67□□□□□ -0.06
CD48-203ENST00000613788 ANKRD20A4Q4UJ75 823 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 SEL1L3Q68CR1 1132 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 NLRP8Q86W28 1048 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 ANKMY2Q8IV38 441 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 IGDCC3Q8IVU1 814 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 OR13C4Q8NGS5 318 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 NELL1Q92832 810 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 DTD2Q96FN9 168 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 DNAJC1Q96KC8 554 aaKnown RBP14.67□□□□□ -0.06
CD48-203ENST00000613788 ZNF778Q96MU6 729 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 PLEKHG4BQ96PX9 1271 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 FAM83DQ9H4H8 585 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 C6orf106Q9H6K1 298 aaPredicted RBP14.67□□□□□ -0.06
CD48-203ENST00000613788 MBD1Q9UIS9 605 aaPredicted RBP14.67□□□□□ -0.06
CD48-203ENST00000613788 APPL1Q9UKG1 709 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 COQ6Q9Y2Z9 468 aa14.67□□□□□ -0.06
CD48-203ENST00000613788 CCDC78A2IDD5 438 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 GOLGA8CPA6NN73 597 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 LATO43561 262 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 FSBPO95073 299 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 PAK4O96013 591 aaPredicted RBP14.66□□□□□ -0.06
CD48-203ENST00000613788 MYBL2P10244 700 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 BPIP17213 487 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 NMBRP28336 390 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 MAT2AP31153 395 aaKnown RBP14.66□□□□□ -0.06
CD48-203ENST00000613788 SPAM1P38567 509 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 DCDC1P59894 354 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 PRAMEP78395 509 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 TMPRSS15P98073 1019 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 ACVR1Q04771 509 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 PTPRCAPQ14761 206 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 FASTKD3Q14CZ7 662 aaKnown RBP14.66□□□□□ -0.06
CD48-203ENST00000613788 ZNF284Q2VY69 593 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 SETMARQ53H47 684 aaPredicted RBP14.66□□□□□ -0.06
CD48-203ENST00000613788 SPANXN3Q5MJ09 141 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 ESRP1Q6NXG1 681 aaKnown RBP14.66□□□□□ -0.06
CD48-203ENST00000613788 ZNF765Q7L2R6 523 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 GPR26Q8NDV2 337 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 GAB3Q8WWW8 586 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 FOXJ1Q92949 421 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 ZNF669Q96BR6 464 aaPredicted RBP14.66□□□□□ -0.06
CD48-203ENST00000613788 NUS1Q96E22 293 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 MFSD3Q96ES6 412 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 CDKN2AIPNLQ96HQ2 116 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 TTC25Q96NG3 672 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 TREX1Q9NSU2 369 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 NFKBIL1Q9UBC1 381 aaPredicted RBP14.66□□□□□ -0.06
CD48-203ENST00000613788 FAM169AQ9Y6X4 670 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 ZDBF2Q9HCK1 2354 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 METTL12A8MUP2 240 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 C10orf142B7Z368 130 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 H7C0S8 307 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 GSTA2P09210 222 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 FAM153BP0C7A2 387 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 GM2AP17900 193 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 PPP2CBP62714 309 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 PPP2CAP67775 309 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 LRRC14Q15048 493 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 FAM153CQ494X1 144 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 MAP9Q49MG5 647 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 SPDYCQ5MJ68 293 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 CES3Q6UWW8 571 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 GSPT2Q8IYD1 628 aaKnown RBP14.66□□□□□ -0.06
CD48-203ENST00000613788 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.66□□□□□ -0.06
CD48-203ENST00000613788 OR13J1Q8NGT2 312 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 DTX3LQ8TDB6 740 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms