RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 OTUD6BQ8N6M0 293 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 OR4K2Q8NGD2 314 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 OR13C4Q8NGS5 318 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 OR4L1Q8NH43 312 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 LRRC8CQ8TDW0 803 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 ZNF473Q8WTR7 871 aaKnown RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 SCG3Q8WXD2 468 aaKnown RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 ASIC4Q96FT7 647 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 ZNF641Q96N77 438 aaPredicted RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 C12orf65Q9H3J6 166 aaKnown RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 EBF3Q9H4W6 596 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 SUV39H2Q9H5I1 410 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 ZNF576Q9H609 170 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 ECT2Q9H8V3 914 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 CDH22Q9UJ99 828 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 TLK1Q9UKI8 766 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 SLC39A10Q9ULF5 831 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 SLC8A2Q9UPR5 921 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 A0A096LPK6 155 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 A0A0J9YYE9 177 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 FAM95CA0A1B0GW59 222 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 A0A1W2PQ67 120 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 OR51F1A6NGY5 319 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 WASH3PC4AMC7 463 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 CCL22O00626 93 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 STX7O15400 261 aaKnown RBP8.91□□□□□ -0.98
CCDC47-207ENST00000612558 TULP3O75386 442 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 TRBC1P01850 177 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 C2P06681 752 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 DLDP09622 509 aaKnown RBP8.91□□□□□ -0.98
CCDC47-207ENST00000612558 STMN1P16949 149 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 OGNP20774 298 aaKnown RBP8.91□□□□□ -0.98
CCDC47-207ENST00000612558 CRABP2P29373 138 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 GKP32189 559 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 HMGCLP35914 325 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 ABCG1P45844 678 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 RECQLP46063 649 aaPredicted RBP8.91□□□□□ -0.98
CCDC47-207ENST00000612558 SERPINB4P48594 390 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 CSRP3P50461 194 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 CLCN5P51795 746 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 CCNHP51946 323 aaPredicted RBP8.91□□□□□ -0.98
CCDC47-207ENST00000612558 POU4F1Q01851 419 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 FCHO2Q0JRZ9 810 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 ZSCAN26Q16670 478 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 PPM1JQ5JR12 505 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 GKAP1Q5VSY0 366 aaPredicted RBP8.91□□□□□ -0.98
CCDC47-207ENST00000612558 TANGO2Q6ICL3 276 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 AFTPHQ6ULP2 937 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 DPY19L3Q6ZPD9 716 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 CMC1Q7Z7K0 106 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 LCA5Q86VQ0 697 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 MFSD6LQ8IWD5 586 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 ETFBKMTQ8IXQ9 262 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 TTC30BQ8N4P2 665 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 PAF1Q8N7H5 531 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 ZNF75CPQ92670 426 aaPredicted RBP8.91□□□□□ -0.98
CCDC47-207ENST00000612558 ECHDC3Q96DC8 303 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 ZFYVE19Q96K21 471 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 MRGPRX3Q96LB0 322 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 SMIM14Q96QK8 99 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 C19orf43Q9BQ61 176 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 C1QTNF2Q9BXJ5 285 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 CIPCQ9C0C6 399 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 S1PR5Q9H228 398 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 SUDS3Q9H7L9 328 aaPredicted RBP8.91□□□□□ -0.98
CCDC47-207ENST00000612558 MANSC1Q9H8J5 431 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 CAB39LQ9H9S4 337 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 FBXO6Q9NRD1 293 aaPredicted RBP8.91□□□□□ -0.98
CCDC47-207ENST00000612558 CATSPERZQ9NTU4 200 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 PGPEP1Q9NXJ5 209 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 CLEC1BQ9P126 229 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 PHTF1Q9UMS5 762 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 ANKRD6Q9Y2G4 727 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 ZNF711Q9Y462 761 aa8.91□□□□□ -0.98
CCDC47-207ENST00000612558 WDR91A4D1P6 747 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 ERICH4A6NGS2 130 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 H7C0S8 307 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 BIRC5O15392 142 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 BNIP3LO60238 219 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 ALPIP09923 528 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 COL6A2P12110 1019 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 CTPS1P17812 591 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 SAT1P21673 171 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 PMLP29590 882 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 SLC12A2P55011 1212 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 RAB10P61026 200 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 DBN1Q16643 649 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 CCDC153Q494R4 210 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 FASTKD1Q53R41 847 aaKnown RBP8.9□□□□□ -0.98
CCDC47-207ENST00000612558 TAF1BQ53T94 588 aaPredicted RBP8.9□□□□□ -0.98
CCDC47-207ENST00000612558 N4BP2L1Q5TBK1 243 aaPredicted RBP8.9□□□□□ -0.98
CCDC47-207ENST00000612558 CNSTQ6PJW8 725 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 VITQ6UXI7 678 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 Q6ZVU0 165 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 RAPH1Q70E73 1250 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 PIGWQ7Z7B1 504 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 CLEC14AQ86T13 490 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 C12orf40Q86WS4 652 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 SLC41A1Q8IVJ1 513 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 TRIM42Q8IWZ5 723 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms