RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SLITRK4Q8IW52 837 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 SCRN2Q96FV2 425 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 MCCC1Q96RQ3 725 aaPredicted RBP17.76■□□□□ 0.43
SSBP1-215ENST00000612337 GSDMCQ9BYG8 508 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 PCDH18Q9HCL0 1135 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 SPATS2LQ9NUQ6 558 aaKnown RBP17.76■□□□□ 0.43
SSBP1-215ENST00000612337 TRNAU1APQ9NX07 287 aaKnown RBP17.76■□□□□ 0.43
SSBP1-215ENST00000612337 PPIL1Q9Y3C6 166 aa17.76■□□□□ 0.43
SSBP1-215ENST00000612337 BZW2Q9Y6E2 419 aaKnown RBP17.76■□□□□ 0.43
SSBP1-215ENST00000612337 NPIPB15A6NHN6 443 aaPredicted RBP17.75■□□□□ 0.43
SSBP1-215ENST00000612337 EFSO43281 561 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 SERPINC1P01008 464 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 FUCA1P04066 466 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 SLC25A11Q02978 314 aaKnown RBP17.75■□□□□ 0.43
SSBP1-215ENST00000612337 TDRD12Q587J7 1177 aaKnown RBP17.75■□□□□ 0.43
SSBP1-215ENST00000612337 ARMC12Q5T9G4 340 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 USP45Q70EL2 814 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 TMPRSS9Q7Z410 1059 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 ZNF438Q7Z4V0 828 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 LRRC49Q8IUZ0 686 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 ZDHHC1Q8WTX9 485 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 SYN2Q92777 582 aaPredicted RBP17.75■□□□□ 0.43
SSBP1-215ENST00000612337 CMKLR1Q99788 373 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 TAAR2Q9P1P5 351 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 RCOR3Q9P2K3 495 aaPredicted RBP17.75■□□□□ 0.43
SSBP1-215ENST00000612337 IP6K2Q9UHH9 426 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 SUFUQ9UMX1 484 aa17.75■□□□□ 0.43
SSBP1-215ENST00000612337 B4GAT1O43505 415 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 ZIC2O95409 532 aaPredicted RBP17.74■□□□□ 0.43
SSBP1-215ENST00000612337 FGF1P05230 155 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 LIPCP11150 499 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 ITIH1P19827 911 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 GNPDA1P46926 289 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 MAZP56270 477 aaKnown RBP17.74■□□□□ 0.43
SSBP1-215ENST00000612337 DPTQ07507 201 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 NR1D2Q14995 579 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 IQCB1Q15051 598 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 CLPPQ16740 277 aaPredicted RBP17.74■□□□□ 0.43
SSBP1-215ENST00000612337 MAP9Q49MG5 647 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 RAET1GQ6H3X3 334 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 Q6ZVL8 140 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 TECPR1Q7Z6L1 1165 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 TSPAN33Q86UF1 283 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 TEX26Q8N6G2 289 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 PIH1D2Q8WWB5 315 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 MED8Q96G25 268 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 BTBD6Q96KE9 485 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 THAP2Q9H0W7 228 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 SUDS3Q9H7L9 328 aaPredicted RBP17.74■□□□□ 0.43
SSBP1-215ENST00000612337 WDR70Q9NW82 654 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 ANAPC7Q9UJX3 599 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 SLC17A4Q9Y2C5 497 aa17.74■□□□□ 0.43
SSBP1-215ENST00000612337 A0A1W2PQJ5 194 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 GOLGA6CA6NDK9 693 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 GOLGA6BA6NDN3 693 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 ZW10O43264 779 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 CPNE6O95741 557 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 GOLGA6DP0CG33 693 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 KRT10P13645 584 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 IL4RP24394 825 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 AK4P27144 223 aaPredicted RBP17.73■□□□□ 0.43
SSBP1-215ENST00000612337 OR1D5P58170 312 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 PEX6Q13608 980 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 KRT81Q14533 505 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 TGIF1Q15583 401 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 PHF19Q5T6S3 580 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 FAM71BQ8TC56 605 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 PTCD2Q8WV60 388 aaKnown RBP17.73■□□□□ 0.43
SSBP1-215ENST00000612337 NUP85Q9BW27 656 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 SEMA6CQ9H3T2 930 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 NT5MQ9NPB1 228 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 GOLGA6AQ9NYA3 693 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 ST14Q9Y5Y6 855 aa17.73■□□□□ 0.43
SSBP1-215ENST00000612337 PRAMEF33A0A0G2JMD5 474 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 RHPN2P1A8MT19 583 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 FZD6O60353 706 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 PRAMEF10O60809 474 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 ECEL1O95672 775 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 CYP1A2P05177 515 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 IVLP07476 585 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 CTPS1P17812 591 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 ADCY8P40145 1251 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 ETV5P41161 510 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 GPR3P46089 330 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 GPR1P46091 355 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 POLD2P49005 469 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 CTBSQ01459 385 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 PTPRRQ15256 657 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 AMZ1Q400G9 498 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 CAVIN1Q6NZI2 390 aaKnown RBP17.72■□□□□ 0.43
SSBP1-215ENST00000612337 SLC30A9Q6PML9 568 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 PIM3Q86V86 326 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 NDUFAF2Q8N183 169 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 USP7Q93009 1102 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 SCARF2Q96GP6 870 aaPredicted RBP17.72■□□□□ 0.43
SSBP1-215ENST00000612337 SEMA3CQ99985 751 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 B3GNT4Q9C0J1 378 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 POLR1EQ9GZS1 481 aaKnown RBP17.72■□□□□ 0.43
SSBP1-215ENST00000612337 RDH14Q9HBH5 336 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 AKAP7Q9P0M2 348 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 324.4 ms