RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 MAGED1Q9Y5V3 778 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 PSMD3O43242 534 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 HSPA13P48723 471 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 CDKN1CP49918 316 aaPredicted RBP14.04□□□□□ -0.16
COL6A1-207ENST00000612273 GRB14Q14449 540 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 FSCN1Q16658 493 aaKnown RBP14.04□□□□□ -0.16
COL6A1-207ENST00000612273 AAK1Q2M2I8 961 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 PABPC1LQ4VXU2 614 aaKnown RBP14.04□□□□□ -0.16
COL6A1-207ENST00000612273 SLC15A3Q8IY34 581 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 PCYOX1LQ8NBM8 494 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 RIN3Q8TB24 985 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 RMDN1Q96DB5 314 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 MS4A4AQ96JQ5 239 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 HAUS8Q9BT25 410 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 OSBPL11Q9BXB4 747 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 BPIFA1Q9NP55 256 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 NEU3Q9UQ49 428 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 SLC27A5Q9Y2P5 690 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 WDR90Q96KV7 1748 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 CCDC162PA2VCL2 907 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 GIPC1O14908 333 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 S1PR4O95977 384 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 EEF1DP29692 281 aaKnown RBP14.04□□□□□ -0.16
COL6A1-207ENST00000612273 TSPY1Q01534 308 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 TSNQ15631 228 aaKnown RBP14.04□□□□□ -0.16
COL6A1-207ENST00000612273 UPP1Q16831 310 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 ANKDD1AQ495B1 522 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 LARP4Q71RC2 724 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL6A1-207ENST00000612273 CNTN4Q8IWV2 1026 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 RTL3Q8N8U3 475 aaKnown RBP14.04□□□□□ -0.16
COL6A1-207ENST00000612273 DDI1Q8WTU0 396 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 NAA50Q9GZZ1 169 aaKnown RBP14.04□□□□□ -0.16
COL6A1-207ENST00000612273 DUS2Q9NX74 493 aaKnown RBP14.04□□□□□ -0.16
COL6A1-207ENST00000612273 RAD54BQ9Y620 910 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 PTCH2Q9Y6C5 1203 aa14.04□□□□□ -0.16
COL6A1-207ENST00000612273 MGEA5O60502 916 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 HNRNPCP07910 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 SLC2A3P11169 496 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 ZNF23P17027 643 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 IMPDH1P20839 514 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 APOFQ13790 326 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 ZNF549Q6P9A3 640 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 PAQR3Q6TCH7 311 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 CMTR2Q8IYT2 770 aaKnown RBP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 TMEM86AQ8N2M4 240 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 PAF1Q8N7H5 531 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 EFHBQ8N7U6 833 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 BHMTQ93088 406 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 PGAP3Q96FM1 320 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 ZNF597Q96LX8 424 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 RANBP9Q96S59 729 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 LTB4R2Q9NPC1 389 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 CMTM6Q9NX76 183 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 VPS28Q9UK41 221 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 H3BNH8 94 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 CDC7O00311 574 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 AZIN1O14977 448 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 CLASP2O75122 1294 aaKnown RBP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 RHOBTB1O94844 696 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 HSPA1AP0DMV8 641 aaKnown RBP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 HSPA1BP0DMV9 641 aaKnown RBP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 ADSLP30566 484 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 CSRP3P50461 194 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 CLCN5P51795 746 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 RFTN1Q14699 578 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 ACAP2Q15057 778 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 KCTD21Q4G0X4 260 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 TMEM214Q6NUQ4 689 aaKnown RBP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 DNAJC14Q6Y2X3 702 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 CALML6Q8TD86 181 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 GAB3Q8WWW8 586 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 IGSF8Q969P0 613 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 ADAM2Q99965 735 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 TUBB1Q9H4B7 451 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 ABCC13Q9NSE7 274 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 RRN3Q9NYV6 651 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 LMCD1Q9NZU5 365 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 A0A0J9YVX5 310 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 AP3B1O00203 1094 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 CLOCKO15516 846 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 GLP2RO95838 553 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 IL10P22301 178 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 PIK3CGP48736 1102 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 RENBPP51606 427 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 PSMD7P51665 324 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 UGT3A1Q6NUS8 523 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 XKR5Q6UX68 686 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 EPHX4Q8IUS5 362 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 CLYBLQ8N0X4 340 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 LRRC43Q8N309 656 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 MIER2Q8N344 545 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 MYEOVQ96EZ4 313 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 TSPAN17Q96FV3 270 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 RNF145Q96MT1 663 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 TSGA13Q96PP4 275 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 CLK4Q9HAZ1 481 aaKnown RBP14.03□□□□□ -0.16
COL6A1-207ENST00000612273 TBC1D13Q9NVG8 400 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 GALPQ9UBC7 116 aa14.03□□□□□ -0.16
COL6A1-207ENST00000612273 RNF112Q9ULX5 631 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms