RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 ACTR1AP61163 376 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 CDK3Q00526 305 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 B4GALNT1Q00973 533 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 TRAF2Q12933 501 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 TBR1Q16650 682 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 PLEKHA7Q6IQ23 1121 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 Q6ZVL8 140 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 HSD11B1LQ7Z5J1 315 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 TSPAN33Q86UF1 283 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 ZNF761Q86XN6 746 aaPredicted RBP13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 FAM129CQ86XR2 697 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 BBS5Q8N3I7 341 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 ATPAF2Q8N5M1 289 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 IL22RA1Q8N6P7 574 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 GPBAR1Q8TDU6 330 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 NSMCE1Q8WV22 266 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 HTR3CQ8WXA8 447 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 PMEPA1Q969W9 287 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 DTD2Q96FN9 168 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 EIF3CQ99613 913 aaKnown RBP13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 PLEKHM1Q9Y4G2 1056 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 TTLL3Q9Y4R7 772 aa13.34□□□□□ -0.27
HMGB1P24-201ENST00000611897 DOPEY2Q9Y3R5 2298 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 TRBV23OR9-2A0A075B6M9 112 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 IGHV5-10-1A0A0J9YXX1 117 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 A0A1W2PQC6 194 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 TMEM191CA6NGB0 347 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 STMND1H3BQB6 276 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 SOCS5O75159 536 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 LRCH4O75427 683 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 ITGB2P05107 769 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 FGF1P05230 155 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 HOXC4P09017 264 aaPredicted RBP13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 NFKBIAP25963 317 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 ADCY8P40145 1251 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 GPR1P46091 355 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 ATP1A2P50993 1020 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 CTBSQ01459 385 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 NSUN2Q08J23 767 aaKnown RBP eCLIP13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 DPYSQ14117 519 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 SNAP47Q5SQN1 464 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 PPP1R2P3Q6NXS1 205 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 TMCO3Q6UWJ1 677 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 ATG14Q6ZNE5 492 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 RFLNAQ6ZTI6 216 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 CYP4V2Q6ZWL3 525 aaPredicted RBP13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 USP45Q70EL2 814 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 IRF2BP2Q7Z5L9 587 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 NRROSQ86YC3 692 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 NRSN1Q8IZ57 195 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 PGBD5Q8N414 524 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 ART4Q93070 314 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 FRMD8Q9BZ67 464 aaPredicted RBP13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 CDH19Q9H159 772 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 NOD2Q9HC29 1040 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 ETNK2Q9NVF9 386 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 TMEM98Q9Y2Y6 226 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 NBASA2RRP1 2371 aa13.33□□□□□ -0.28
HMGB1P24-201ENST00000611897 ZW10O43264 779 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 HTRA2O43464 458 aaPredicted RBP13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 FTLP02792 175 aaPredicted RBP13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 FUCA1P04066 466 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 TCF4P15884 667 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 CSF2RBP32927 897 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 CSTF2P33240 577 aaKnown RBP eCLIP13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 GJC1P36383 396 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 MMP13P45452 471 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 CSRP3P50461 194 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 ITKQ08881 620 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 ARMC12Q5T9G4 340 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 ZNF574Q6ZN55 896 aaPredicted RBP13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 CCDC112Q8NEF3 446 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 ZNF599Q96NL3 588 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 SMIM14Q96QK8 99 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 OR2M4Q96R27 311 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 NUDCD1Q96RS6 583 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 TEX101Q9BY14 249 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 HAUS4Q9H6D7 363 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 NT5MQ9NPB1 228 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 TRNAU1APQ9NX07 287 aaKnown RBP13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 KCNK4Q9NYG8 393 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 TMEM9Q9P0T7 183 aa13.32□□□□□ -0.28
HMGB1P24-201ENST00000611897 A8MU76 341 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 HGSO14964 777 aaPredicted RBP13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 PPM1DO15297 605 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 INPP4BO15327 924 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 PPFIA2O75334 1257 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 ASMTLO95671 621 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 FGF3P11487 239 aaPredicted RBP13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 CD82P27701 267 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 IL1R2P27930 398 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 CD1CP29017 333 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 HSPA9P38646 679 aaKnown RBP13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 SSR1P43307 286 aaKnown RBP13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 MAPK9P45984 424 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 EPHB1P54762 984 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 CLCA4Q14CN2 919 aa13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 E4F1Q66K89 784 aaPredicted RBP13.31□□□□□ -0.28
HMGB1P24-201ENST00000611897 RBM43Q6ZSC3 357 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms