RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CCDC68Q9H2F9 335 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 BPIFA1Q9NP55 256 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 TNFRSF12AQ9NP84 129 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 CDH22Q9UJ99 828 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 FAM50BQ9Y247 325 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 RGSL1A5PLK6 1076 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 AIM2O14862 343 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 SMIM24O75264 130 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 NDUFS3O75489 264 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 SRP72O76094 671 aaKnown RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 RHOBTB1O94844 696 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 SORBS2O94875 1100 aaKnown RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 TSPAN8P19075 237 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 IMPDH1P20839 514 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 LPOP22079 712 aaPredicted RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 CDC25CP30307 473 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 NUDT2P50583 147 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 ZNF783Q6ZMS7 281 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 ITIH5Q86UX2 942 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 AFAP1L2Q8N4X5 818 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 HJURPQ8NCD3 748 aaPredicted RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 ADAMTS19Q8TE59 1207 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 FCF1Q9Y324 198 aaKnown RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 A0A0U1RQS6 177 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 SDHDO14521 159 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 LUC7L3O95232 432 aaKnown RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 CSF2RAP15509 400 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 ITGB8P26012 769 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 CSKP41240 450 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 CDKN1CP49918 316 aaPredicted RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 SUOXP51687 545 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 RHOAP61586 193 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 WDR5P61964 334 aaKnown RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 BTKQ06187 659 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 TBL3Q12788 808 aaKnown RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 ZRSR2Q15696 482 aaKnown RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 EML3Q32P44 896 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 ZNF678Q5SXM1 525 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 C1orf53Q5VUE5 145 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 CPSF7Q8N684 471 aaKnown RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 EFCAB3Q8N7B9 438 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 CEP70Q8NHQ1 597 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 WFDC5Q8TCV5 224 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 STON2Q8WXE9 905 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 MAELQ96JY0 434 aaKnown RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 GSTO2Q9H4Y5 243 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 IL21Q9HBE4 155 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 POPDC3Q9HBV1 291 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 POLR3BQ9NW08 1133 aaPredicted RBP13.6□□□□□ -0.23
NEK3-205ENST00000610828 VPS51Q9UID3 782 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 FKBPLQ9UIM3 349 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 WASF2Q9Y6W5 498 aa13.6□□□□□ -0.23
NEK3-205ENST00000610828 PLXNA4Q9HCM2 1894 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 H3BMM5 538 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 GREM1O60565 184 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 LATS1O95835 1130 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 GABRR2P28476 465 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 MC4RP32245 332 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 RFC2P35250 354 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 VHLP40337 213 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 CYP4F8P98187 520 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 CYLC2Q14093 348 aaPredicted RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 OR4D1Q15615 310 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 MUM1Q2TAK8 710 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 PABPC1LQ4VXU2 614 aaKnown RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 INO80DQ53TQ3 878 aaPredicted RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 ATXN7L2Q5T6C5 722 aaPredicted RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 PSAPL1Q6NUJ1 521 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 NCEH1Q6PIU2 408 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 RP9Q8TA86 221 aaKnown RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 LPGAT1Q92604 370 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 FAR2Q96K12 515 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 YME1L1Q96TA2 773 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 ZNF385DQ9H6B1 395 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 ZBTB26Q9HCK0 441 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 TAS2R13Q9NYV9 303 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 LHX3Q9UBR4 397 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 COPG1Q9Y678 874 aaKnown RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 UBXN8O00124 270 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 SLC22A2O15244 555 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 STX7O15400 261 aaKnown RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 CCNT2O60583 730 aaKnown RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 MT-CO1P00395 513 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 CKMP06732 381 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 C1QTNF8P60827 252 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 HERVK_113P63132 956 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 GALNT1Q10472 559 aaPredicted RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 TCHHL1Q5QJ38 904 aaPredicted RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 PAQR3Q6TCH7 311 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 LRRC74BQ6ZQY2 392 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 MYLK4Q86YV6 388 aaPredicted RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 HPS6Q86YV9 775 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 MFN1Q8IWA4 741 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 CMTR2Q8IYT2 770 aaKnown RBP13.59□□□□□ -0.23
NEK3-205ENST00000610828 MAB21L3Q8N8X9 362 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 DDI1Q8WTU0 396 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 NRG4Q8WWG1 115 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 L3HYPDHQ96EM0 354 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 ANKRD27Q96NW4 1050 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 BEGAINQ9BUH8 593 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms