RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 DPPA4Q7L190 304 aa3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 FASTKD5Q7L8L6 764 aaKnown RBP3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 CHERPQ8IWX8 916 aaKnown RBP3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 PGBD5Q8N414 524 aa3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 SCFD2Q8WU76 684 aa3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 TXNDC15Q96J42 360 aa3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 ZNF479Q96JC4 524 aa3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 OR2A14Q96R47 310 aa3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 SDF4Q9BRK5 362 aa3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 FTOQ9C0B1 505 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 CNGB3Q9NQW8 809 aa3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 GPR34Q9UPC5 381 aa3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 ERVK-11Q9UQG0 969 aa3.93□□□□□ -1.78
RNU6-88P-201ENST00000606801 LINC01553A4QN01 128 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 MYO1GB0I1T2 1018 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 GTPBP1O00178 669 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 SOCS6O14544 535 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 AP3D1O14617 1153 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 VILLO15195 856 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 SMAD6O43541 496 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 HCRTR2O43614 444 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 PLA2G2AP14555 144 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 CD58P19256 250 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 ACADLP28330 430 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 PPARGP37231 505 aaPredicted RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 CREB5Q02930 508 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 GRSF1Q12849 480 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 DHX34Q14147 1143 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 PPP6R3Q5H9R7 873 aaPredicted RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 WDR78Q5VTH9 848 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 ZNF280DQ6N043 979 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 METTL2BQ6P1Q9 378 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 SARM1Q6SZW1 724 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 SEPT14Q6ZU15 432 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 CHST9Q7L1S5 443 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 TAOK1Q7L7X3 1001 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 TSPAN33Q86UF1 283 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 BEST3Q8N1M1 668 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 ZNF114Q8NC26 417 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 OR14A16Q8NHC5 309 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 WASF1Q92558 559 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 NSUN4Q96CB9 384 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 PHF21BQ96EK2 531 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 RRNAD1Q96FB5 475 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 SCMH1Q96GD3 660 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 GRAMD2BQ96HH9 432 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 METTL2AQ96IZ6 378 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 RSRC1Q96IZ7 334 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 EGLN2Q96KS0 407 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 CSF3RQ99062 836 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 SEPT5Q99719 369 aaPredicted RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 SRSF8Q9BRL6 282 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 IFIH1Q9BYX4 1025 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 KAT14Q9H8E8 782 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 SLC28A3Q9HAS3 691 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 SEBOXQ9HB31 216 aaPredicted RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 RRP7BPQ9NSQ0 103 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 SETD4Q9NVD3 440 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 HAUS2Q9NVX0 235 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 MTMR10Q9NXD2 777 aa3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 LAS1LQ9Y4W2 734 aaKnown RBP3.92□□□□□ -1.78
RNU6-88P-201ENST00000606801 hDV102S1A0JD36 115 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 SCAMP1O15126 338 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 PLRG1O43660 514 aaKnown RBP3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 HNRNPCL1O60812 293 aaKnown RBP3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 SLC25A12O75746 678 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 ACAA1P09110 424 aaPredicted RBP3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 IGHV4-30-4P0DP06 118 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 C21orf33P30042 268 aaPredicted RBP3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 STX2P32856 288 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 ACSL1P33121 698 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 RAD23BP54727 409 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 GALCP54803 685 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 CDH8P55286 799 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 HNRNPH2P55795 449 aaKnown RBP3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 NLRP5P59047 1200 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 DSC1Q08554 894 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 GOLGA8DPQ0D2H9 430 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 AMZ1Q400G9 498 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 TMEM198Q66K66 360 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 C16orf54Q6UWD8 224 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 SZRD1Q7Z422 152 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 NRROSQ86YC3 692 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 ADGRF2Q8IZF7 708 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 FBXL14Q8N1E6 418 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 IQCF1Q8N6M8 205 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 OR2AK2Q8NG84 335 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 SPATA22Q8NHS9 363 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 FAM216AQ8WUB2 273 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 NEUROG1Q92886 237 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 ELMOD3Q96FG2 381 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 PCYT2Q99447 389 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 ACSS1Q9NUB1 689 aaPredicted RBP3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 OCIAD1Q9NX40 245 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 FBXL17Q9UF56 701 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 CLIC4Q9Y696 253 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 MAU2Q9Y6X3 613 aa3.91□□□□□ -1.78
RNU6-88P-201ENST00000606801 AKR1B15C9JRZ8 316 aaPredicted RBP3.9□□□□□ -1.79
RNU6-88P-201ENST00000606801 PROB1E7EW31 1015 aa3.9□□□□□ -1.79
RNU6-88P-201ENST00000606801 ATP2A1O14983 1001 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms