RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 FAM131BQ86XD5 332 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 CPNE8Q86YQ8 564 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 TRIM42Q8IWZ5 723 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 HJURPQ8NCD3 748 aaPredicted RBP12.32□□□□□ -0.44
HLA-F-230ENST00000606273 FRS2Q8WU20 508 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 NAT6Q93015 286 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 AZIN2Q96A70 460 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 CCDC42Q96M95 316 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 IL12RB2Q99665 862 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 PRMT1Q99873 361 aaKnown RBP12.32□□□□□ -0.44
HLA-F-230ENST00000606273 EPB41L5Q9HCM4 733 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 PARVAQ9NVD7 372 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.32□□□□□ -0.44
HLA-F-230ENST00000606273 ARHGEF38Q9NXL2 777 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 STAP1Q9ULZ2 295 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 HS3ST3A1Q9Y663 406 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 PRAMEF33A0A0G2JMD5 474 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 SPTY2D1-AS1A0A0U1RR47 76 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 PRAMEF10O60809 474 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 PAGE1O75459 146 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 MED26O95402 600 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 SDC4P31431 198 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 CCR1P32246 355 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 NNMTP40261 264 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 ZNF143P52747 638 aaPredicted RBP12.31□□□□□ -0.44
HLA-F-230ENST00000606273 CDH18Q13634 790 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 NUGGCQ68CJ6 796 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 PPP1R2P3Q6NXS1 205 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 DCUN1D2Q6PH85 259 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 HORMAD1Q86X24 394 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 UNC45BQ8IWX7 931 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 SLC35F3Q8IY50 421 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 CFAP52Q8N1V2 620 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 CCDC185Q8N715 623 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 LMX1AQ8TE12 382 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 FAM172AQ8WUF8 416 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 RNF34Q969K3 372 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 PMEPA1Q969W9 287 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 STRADBQ9C0K7 418 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 TKTL2Q9H0I9 626 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 DEF6Q9H4E7 631 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 ZNF71Q9NQZ8 489 aaPredicted RBP12.31□□□□□ -0.44
HLA-F-230ENST00000606273 RRN3Q9NYV6 651 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 IMPACTQ9P2X3 320 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 PISDQ9UG56 409 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 REXO2Q9Y3B8 237 aaKnown RBP12.31□□□□□ -0.44
HLA-F-230ENST00000606273 HS3ST4Q9Y661 456 aa12.31□□□□□ -0.44
HLA-F-230ENST00000606273 HMX2A2RU54 273 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 ANKRD62A6NC57 917 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 POM121BA6NF01 834 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 MCF2LO15068 1137 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 MTSS1O43312 755 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 LUC7L3O95232 432 aaKnown RBP12.3□□□□□ -0.44
HLA-F-230ENST00000606273 LCA5LO95447 670 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 APOEP02649 317 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 JMJD7P0C870 316 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 MYBL1P10243 752 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 TCF4P15884 667 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 TACR2P21452 398 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 PIP5KL1Q5T9C9 394 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 PARGQ86W56 976 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 CIR1Q86X95 450 aaPredicted RBP12.3□□□□□ -0.44
HLA-F-230ENST00000606273 CCDC117Q8IWD4 279 aaPredicted RBP12.3□□□□□ -0.44
HLA-F-230ENST00000606273 ZNF683Q8IZ20 524 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 OR8D1Q8WZ84 308 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 BTN2A3PQ96KV6 586 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 PEBP4Q96S96 227 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 CNPY3Q9BT09 278 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 NUP85Q9BW27 656 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 WDCPQ9H6R7 721 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 SYNDIG1Q9H7V2 258 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 FOXJ2Q9P0K8 574 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 PADI4Q9UM07 663 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 SOX13Q9UN79 622 aa12.3□□□□□ -0.44
HLA-F-230ENST00000606273 FBN2P35556 2912 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 A0A0U1RQJ8 604 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 A6NNZ2 444 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 C1QTNF3-AMACRE9PGA6 284 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 FAM72CH0Y354 149 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 GCATO75600 419 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 AGFG2O95081 481 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 F9P00740 461 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 H2AFZP0C0S5 128 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 ITIH1P19827 911 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 PSMA2P25787 234 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 ELAVL4P26378 380 aaKnown RBP12.29□□□□□ -0.44
HLA-F-230ENST00000606273 CCKBRP32239 447 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 BRMS1LQ5PSV4 323 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 FAM72AQ5TYM5 149 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 FAM72DQ6L9T8 149 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 FBXL22Q6P050 247 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 CYP4V2Q6ZWL3 525 aaPredicted RBP12.29□□□□□ -0.44
HLA-F-230ENST00000606273 H2AFVQ71UI9 128 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 STRADAQ7RTN6 431 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 CHSY1Q86X52 802 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 FAM72BQ86X60 149 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 ZDHHC13Q8IUH4 622 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 LGI2Q8N0V4 545 aa12.29□□□□□ -0.44
HLA-F-230ENST00000606273 PYROXD2Q8N2H3 581 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms