RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, human

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-205	ENST00000603651	S1PR1	P21453	382 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	CORO1A	P31146	461 aa	Known RBP	4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	TAF12	Q16514	161 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	BBS12	Q6ZW61	710 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	LRRC8D	Q7L1W4	858 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	RRM2B	Q7LG56	351 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	RNF113B	Q8IZP6	322 aa	Known RBP	4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	SPATA6L	Q8N4H0	392 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	GRAPL	Q8TC17	118 aa	Predicted RBP	4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	TKTL2	Q9H0I9	626 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	HINT3	Q9NQE9	182 aa	Known RBP	4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	TCF19	Q9Y242	345 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	GOLGA6L10	A0A0M3HER8	536 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	PIP5K1C	O60331	668 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	GUCY1B2	O75343	617 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	CNTF	P26441	200 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	RGS19	P49795	217 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	METAP2	P50579	478 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	HNRNPH2	P55795	449 aa	Known RBP	4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	NAE1	Q13564	534 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	EFR3A	Q14156	821 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	RNPS1	Q15287	305 aa	Known RBP	4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	HAPLN4	Q86UW8	402 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	CPO	Q8IVL8	374 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	PABPC5	Q96DU9	382 aa	Known RBP	4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	KLHL15	Q96M94	604 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	PCDH9	Q9HC56	1237 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	KLHL1	Q9NR64	748 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	OR2W1	Q9Y3N9	320 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	LOXL2	Q9Y4K0	774 aa		4.92	□□□□□ -1.62
TUBE1-205	ENST00000603651	ANTXRL	A6NF34	631 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	LDLR	P01130	860 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	IRF1	P10914	325 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	RRM1	P23921	792 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	TIMP3	P35625	211 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	PSMC2	P35998	433 aa	Known RBP	4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	CDKN1A	P38936	164 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	USP8	P40818	1118 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	CCR5	P51681	352 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	KRTAP10-5	P60370	271 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	UFM1	P61960	85 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	C14orf177	Q52M58	125 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	PDSS1	Q5T2R2	415 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	DUS1L	Q6P1R4	473 aa	Known RBP	4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	ZNF852	Q6ZMS4	543 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	NFE4	Q86UQ8	179 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	MAGEC3	Q8TD91	643 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	PPM1E	Q8WY54	764 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	GPR63	Q9BZJ6	419 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	ZNF696	Q9H7X3	374 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	BEX4	Q9NWD9	120 aa	Predicted RBP	4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	ERVK-11	Q9UQG0	969 aa		4.91	□□□□□ -1.62
TUBE1-205	ENST00000603651	TNPO2	O14787	897 aa	Known RBP	4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	PEX14	O75381	377 aa		4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	HMGB1	P09429	215 aa	Known RBP	4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	IFIT1	P09914	478 aa	Known RBP	4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	MAOA	P21397	527 aa		4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	ERVK11-1	P61568	191 aa		4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	PITX1	P78337	314 aa	Predicted RBP	4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	PPFIA1	Q13136	1202 aa		4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	C1orf87	Q8N0U7	546 aa		4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	CTCFL	Q8NI51	663 aa	Predicted RBP	4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	ZNF501	Q96CX3	271 aa	Predicted RBP	4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	ORAI1	Q96D31	301 aa		4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	ZNF354B	Q96LW1	612 aa		4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	TMEM30A	Q9NV96	361 aa		4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	GPR52	Q9Y2T5	361 aa		4.9	□□□□□ -1.63
TUBE1-205	ENST00000603651	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	SEC14L5	O43304	696 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	EGF	P01133	1207 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	AMPH	P49418	695 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	GNAQ	P50148	359 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	RPP30	P78346	268 aa	Known RBP	4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	SLC9B1	Q4ZJI4	515 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	SIRPB2	Q5JXA9	342 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	GGNBP1	Q5YKI7	109 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	TXNDC8	Q6A555	127 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	TRNP1	Q6NT89	227 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	METTL2B	Q6P1Q9	378 aa	Known RBP	4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	QSOX2	Q6ZRP7	698 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	ANKRD42	Q8N9B4	389 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	METTL2A	Q96IZ6	378 aa	Known RBP	4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	ISCA1	Q9BUE6	129 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	UPF2	Q9HAU5	1272 aa	Known RBP	4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	MMP25	Q9NPA2	562 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	MAP3K20	Q9NYL2	800 aa	Known RBP	4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	A4GNT	Q9UNA3	340 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	TAF1	P21675	1872 aa		4.89	□□□□□ -1.63
TUBE1-205	ENST00000603651	LILRA5	A6NI73	299 aa		4.88	□□□□□ -1.63
TUBE1-205	ENST00000603651	EDIL3	O43854	480 aa		4.88	□□□□□ -1.63
TUBE1-205	ENST00000603651	TBX6	O95947	436 aa	Predicted RBP	4.88	□□□□□ -1.63
TUBE1-205	ENST00000603651	COX7A2	P14406	83 aa		4.88	□□□□□ -1.63
TUBE1-205	ENST00000603651	GTF2H2	Q13888	395 aa		4.88	□□□□□ -1.63
TUBE1-205	ENST00000603651	COL28A1	Q2UY09	1125 aa		4.88	□□□□□ -1.63
TUBE1-205	ENST00000603651	GTF2H2C	Q6P1K8	395 aa		4.88	□□□□□ -1.63
TUBE1-205	ENST00000603651	RAD9B	Q6WBX8	426 aa		4.88	□□□□□ -1.63
TUBE1-205	ENST00000603651	LRRTM4	Q86VH4	590 aa		4.88	□□□□□ -1.63
TUBE1-205	ENST00000603651	ZBTB10	Q96DT7	871 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms