RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 DPTQ07507 201 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 GALNT3Q14435 633 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 QPCTQ16769 361 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 Q6ZVL8 140 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 HSD11B1LQ7Z5J1 315 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 TSPAN33Q86UF1 283 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 NLRP8Q86W28 1048 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 HID1Q8IV36 788 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 FSTL5Q8N475 847 aaPredicted RBP19.34■□□□□ 0.69
UPF1-212ENST00000601689 OR56A4Q8NGH8 313 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 SPATA22Q8NHS9 363 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 BAHD1Q8TBE0 780 aaPredicted RBP19.34■□□□□ 0.69
UPF1-212ENST00000601689 LMX1AQ8TE12 382 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 MAIP1Q8WWC4 291 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 GPR63Q9BZJ6 419 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 CDH19Q9H159 772 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 MAGEE1Q9HCI5 957 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 NLGN3Q9NZ94 848 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 MOSPD1Q9UJG1 213 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 ANGPTL2Q9UKU9 493 aa19.34■□□□□ 0.69
UPF1-212ENST00000601689 COL5A1P20908 1838 aaPredicted RBP19.34■□□□□ 0.69
UPF1-212ENST00000601689 TNFRSF10CO14798 259 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 FFAR2O15552 330 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 CLDN7O95471 211 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 PRLP01236 227 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 ANXA6P08133 673 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 C1SP09871 688 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 HK3P52790 923 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 STC1P52823 247 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 SRP54P61011 504 aaKnown RBP19.33■□□□□ 0.68
UPF1-212ENST00000601689 EIF2B5Q13144 721 aaKnown RBP19.33■□□□□ 0.68
UPF1-212ENST00000601689 PRRT3Q5FWE3 981 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 MEI1Q5TIA1 1274 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 AADACL2Q6P093 401 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 ZNF765Q7L2R6 523 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 RD3Q7Z3Z2 195 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 GKN2Q86XP6 184 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 ZNF548Q8NEK5 533 aaPredicted RBP19.33■□□□□ 0.68
UPF1-212ENST00000601689 OR4C6Q8NH72 309 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 CARD9Q9H257 536 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 TRABDQ9H4I3 376 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 USP29Q9HBJ7 922 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 UBP1Q9NZI7 540 aa19.33■□□□□ 0.68
UPF1-212ENST00000601689 TPP1O14773 563 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 MYCLP1P12525 358 aaPredicted RBP19.32■□□□□ 0.68
UPF1-212ENST00000601689 CKMT2P17540 419 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 HLA-DPA1P20036 260 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 RPIAP49247 311 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 WNT3AP56704 352 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 PEX6Q13608 980 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 ANKRD20A2Q5SQ80 823 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 ANKRD20A1Q5TYW2 823 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 ANKRD20A3Q5VUR7 823 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 TECPR1Q7Z6L1 1165 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 HEATR4Q86WZ0 1026 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 CBARPQ8N350 705 aaPredicted RBP19.32■□□□□ 0.68
UPF1-212ENST00000601689 SLC25A45Q8N413 288 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 PLA2G15Q8NCC3 412 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 FUBP1Q96AE4 644 aaKnown RBP19.32■□□□□ 0.68
UPF1-212ENST00000601689 GBA3Q9H227 469 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 HACD3Q9P035 362 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 PCDHGA1Q9Y5H4 931 aa19.32■□□□□ 0.68
UPF1-212ENST00000601689 SPTBN2O15020 2390 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 PMLP29590 882 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 STIP1P31948 543 aaKnown RBP19.31■□□□□ 0.68
UPF1-212ENST00000601689 CD68P34810 354 aaPredicted RBP19.31■□□□□ 0.68
UPF1-212ENST00000601689 ILKQ13418 452 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 CCDC157Q569K6 752 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 ZCCHC8Q6NZY4 707 aaKnown RBP19.31■□□□□ 0.68
UPF1-212ENST00000601689 ARHGEF18Q6ZSZ5 1173 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 GALNT15Q8N3T1 639 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 IPMKQ8NFU5 416 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 ADAMTS14Q8WXS8 1223 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 TSACCQ96A04 125 aaPredicted RBP19.31■□□□□ 0.68
UPF1-212ENST00000601689 TADA1Q96BN2 335 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 SPATA13Q96N96 652 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 ABCG8Q9H221 673 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 FAM83DQ9H4H8 585 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 CD84Q9UIB8 345 aa19.31■□□□□ 0.68
UPF1-212ENST00000601689 SIGLEC6O43699 453 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 RFPL3O75679 317 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 FGF1P05230 155 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 SPINT3P49223 89 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 CDK3Q00526 305 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 KLF1Q13351 362 aaPredicted RBP19.3■□□□□ 0.68
UPF1-212ENST00000601689 IHHQ14623 411 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 P3H1Q32P28 736 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 ZDHHC20Q5W0Z9 365 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 LVRNQ6Q4G3 990 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 KANSL1Q7Z3B3 1105 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 TRIB3Q96RU7 358 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 FAM118BQ9BPY3 351 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 TEX101Q9BY14 249 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 UCKL1Q9NWZ5 548 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.3■□□□□ 0.68
UPF1-212ENST00000601689 SHOC2Q9UQ13 582 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 ZNF711Q9Y462 761 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 DGKBQ9Y6T7 804 aa19.3■□□□□ 0.68
UPF1-212ENST00000601689 LOC285095A0A1B0GVY8 99 aa19.29■□□□□ 0.68
UPF1-212ENST00000601689 C5orf60A6NFR6 353 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms