RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 ARNTLO00327 626 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 NPC1O15118 1278 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 BUD23O43709 281 aaKnown RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 GLRA3O75311 464 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 KAT7O95251 611 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 ASMTLO95671 621 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 ALDOAP04075 364 aaKnown RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 PRNPP04156 253 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 GSTA1P08263 222 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 ALPIP09923 528 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 CYP2A6P11509 494 aaPredicted RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 GABRB3P28472 473 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 HNF1BP35680 557 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 MPP1Q00013 466 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 POU4F1Q01851 419 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 SMAD4Q13485 552 aaKnown RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 PTPRCAPQ14761 206 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 HNRNPA1L2Q32P51 320 aaKnown RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 AARS2Q5JTZ9 985 aaKnown RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 ZDHHC20Q5W0Z9 365 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 LYSMD3Q7Z3D4 306 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 CCDC91Q7Z6B0 441 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 CBARPQ8N350 705 aaPredicted RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 MGARPQ8TDB4 240 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 CKAP2Q8WWK9 683 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 OR8D1Q8WZ84 308 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 KLHL32Q96NJ5 620 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 MCCC1Q96RQ3 725 aaPredicted RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 RPP25Q9BUL9 199 aaKnown RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 TRPV5Q9NQA5 729 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 SNX15Q9NRS6 342 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 INTS10Q9NVR2 710 aaKnown RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 POLR3BQ9NW08 1133 aaPredicted RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 THAP10Q9P2Z0 257 aaPredicted RBP13.7□□□□□ -0.22
IRF3-229ENST00000601373 ANKRD6Q9Y2G4 727 aa13.7□□□□□ -0.22
IRF3-229ENST00000601373 C1orf232A0A0U1RR37 186 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 FAM95CA0A1B0GW59 222 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 GMNCA6NCL1 334 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 H3BQ06 376 aaPredicted RBP13.69□□□□□ -0.22
IRF3-229ENST00000601373 LEFTY1O75610 366 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 HAUS5O94927 633 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 S1PR4O95977 384 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 COL6A2P12110 1019 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 CRABP2P29373 138 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 PMLP29590 882 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 PPARGP37231 505 aaPredicted RBP13.69□□□□□ -0.22
IRF3-229ENST00000601373 TNFRSF4P43489 277 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 SLC12A2P55011 1212 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 WDR4P57081 412 aaKnown RBP13.69□□□□□ -0.22
IRF3-229ENST00000601373 USP10Q14694 798 aaKnown RBP13.69□□□□□ -0.22
IRF3-229ENST00000601373 LRRC14Q15048 493 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 CDKN3Q16667 212 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 TYSND1Q2T9J0 566 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 ZNF805Q5CZA5 627 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 ARSIQ5FYB1 569 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 RNF187Q5TA31 235 aaPredicted RBP13.69□□□□□ -0.22
IRF3-229ENST00000601373 LVRNQ6Q4G3 990 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 KYAT3Q6YP21 454 aaKnown RBP13.69□□□□□ -0.22
IRF3-229ENST00000601373 TAX1BP1Q86VP1 789 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 ZSWIM9Q86XI8 627 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 TMIEQ8NEW7 156 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 TTC8Q8TAM2 541 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.69□□□□□ -0.226e-6■■□□□ 14.1
IRF3-229ENST00000601373 TSPAN17Q96FV3 270 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 MAGEB18Q96M61 343 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 SMIM14Q96QK8 99 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 TTC1Q99614 292 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 SLC13A1Q9BZW2 595 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 EPN3Q9H201 632 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 VPS11Q9H270 941 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 TMEM245Q9H330 911 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 SUDS3Q9H7L9 328 aaPredicted RBP13.69□□□□□ -0.22
IRF3-229ENST00000601373 FBXO6Q9NRD1 293 aaPredicted RBP13.69□□□□□ -0.22
IRF3-229ENST00000601373 PCMTD2Q9NV79 361 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.69□□□□□ -0.22
IRF3-229ENST00000601373 APPL1Q9UKG1 709 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 TLK1Q9UKI8 766 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 SLC39A10Q9ULF5 831 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 PLLPQ9Y342 182 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 STARD13Q9Y3M8 1113 aa13.69□□□□□ -0.22
IRF3-229ENST00000601373 A0A096LPK6 155 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 OR51F1A6NGY5 319 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 CCL22O00626 93 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 C2P06681 752 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 STMN1P16949 149 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 ZNF30P17039 623 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 XPAP23025 273 aaPredicted RBP13.68□□□□□ -0.22
IRF3-229ENST00000601373 MC4RP32245 332 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 FOXN2P32314 431 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 TTPAP49638 278 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 STC1P52823 247 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 PPARDQ03181 441 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 CACNG1Q06432 222 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 PDE1CQ14123 709 aaPredicted RBP13.68□□□□□ -0.22
IRF3-229ENST00000601373 ZNF234Q14588 700 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 SMAD2Q15796 467 aaKnown RBP13.68□□□□□ -0.22
IRF3-229ENST00000601373 TAF1BQ53T94 588 aaPredicted RBP13.68□□□□□ -0.22
IRF3-229ENST00000601373 LYPLAL1Q5VWZ2 237 aa13.68□□□□□ -0.22
IRF3-229ENST00000601373 FAM45BPQ6NSW5 357 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms