RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 GRID2IPA4D2P6 1211 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 TMEM202A6NGA9 273 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 HACD1B0YJ81 288 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 APOC4-APOC2K7ER74 178 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 APOC2P02655 101 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 PTPN3P26045 913 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 GSDMDP57764 484 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 E2F1Q01094 437 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 KIF5AQ12840 1032 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 PTPRRQ15256 657 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 DEFB133Q30KQ1 61 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 TEX44Q53QW1 395 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 C6orf132Q5T0Z8 1188 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 KAZNQ674X7 775 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 ENPP7Q6UWV6 458 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 NT5DC3Q86UY8 548 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 NLRP8Q86W28 1048 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 HEATR4Q86WZ0 1026 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 HID1Q8IV36 788 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 PELI3Q8N2H9 469 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 OR1E3Q8WZA6 343 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 TEKT5Q96M29 485 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 AGAP3Q96P47 875 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 TRIB3Q96RU7 358 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 RBM15Q96T37 977 aaKnown RBP eCLIP17.17■□□□□ 0.34
HERC3-214ENST00000601319 VAT1Q99536 393 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 CEP41Q9BYV8 373 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 CLPBQ9H078 707 aa17.17■□□□□ 0.34
HERC3-214ENST00000601319 PHPT1Q9NRX4 125 aaPredicted RBP17.17■□□□□ 0.34
HERC3-214ENST00000601319 DSPP15924 2871 aaKnown RBP17.16■□□□□ 0.34
HERC3-214ENST00000601319 ASXL3Q9C0F0 2248 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 ITPR1Q14643 2758 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 ANKRD66B4E2M5 251 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 PYGLP06737 847 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 ANXA6P08133 673 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 NAP1L1P55209 391 aaKnown RBP17.16■□□□□ 0.34
HERC3-214ENST00000601319 PTSQ03393 145 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 WASHC5Q12768 1159 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 XRCC4Q13426 336 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 CAMK2BQ13554 666 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 QPCTQ16769 361 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 DENND2CQ68D51 928 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 NRSN1Q8IZ57 195 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 GLMNQ92990 594 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 TSACCQ96A04 125 aaPredicted RBP17.16■□□□□ 0.34
HERC3-214ENST00000601319 SMIM14Q96QK8 99 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 LGR4Q9BXB1 951 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 GLOD4Q9HC38 313 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 SEPT10Q9P0V9 454 aa17.16■□□□□ 0.34
HERC3-214ENST00000601319 ARHGEF17Q96PE2 2063 aaPredicted RBP17.16■□□□□ 0.34
HERC3-214ENST00000601319 RP1P56715 2156 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 YY2O15391 372 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 SOD1P00441 154 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 TNFP01375 233 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 CAPNS1P04632 268 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 CTSEP14091 401 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 RPIAP49247 311 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 RWDD2BP57060 319 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 CDK3Q00526 305 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 C1orf61Q13536 156 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 NOMO1Q15155 1222 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 CDKN3Q16667 212 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 HES3Q5TGS1 186 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 KCTD16Q68DU8 428 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 ADAMTSL4Q6UY14 1074 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 GKN2Q86XP6 184 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 SYCE1Q8N0S2 351 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 AP2M1Q96CW1 435 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 DESI2Q9BSY9 194 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 MLPHQ9BV36 600 aaPredicted RBP17.15■□□□□ 0.34
HERC3-214ENST00000601319 FRMD8Q9BZ67 464 aaPredicted RBP17.15■□□□□ 0.34
HERC3-214ENST00000601319 OSBPL8Q9BZF1 889 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 DKK4Q9UBT3 224 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 PKD1L2Q7Z442 2459 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 KNTC1P50748 2209 aa17.15■□□□□ 0.34
HERC3-214ENST00000601319 C1orf232A0A0U1RR37 186 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 PRSS38A1L453 326 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 EME2A4GXA9 379 aaPredicted RBP17.14■□□□□ 0.33
HERC3-214ENST00000601319 RGSL1A5PLK6 1076 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 MIF4GDA9UHW6 222 aaKnown RBP17.14■□□□□ 0.33
HERC3-214ENST00000601319 CELA2BP08218 269 aaPredicted RBP17.14■□□□□ 0.33
HERC3-214ENST00000601319 INSM1Q01101 510 aaPredicted RBP17.14■□□□□ 0.33
HERC3-214ENST00000601319 LLGL1Q15334 1064 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 NR0B2Q15466 257 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 RAET1GQ6H3X3 334 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 NYAP1Q6ZVC0 841 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 ZC3H18Q86VM9 953 aaKnown RBP17.14■□□□□ 0.33
HERC3-214ENST00000601319 SLC35F3Q8IY50 421 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 ARL10Q8N8L6 244 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 DCBLD1Q8N8Z6 715 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 HTR3CQ8WXA8 447 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 SCG3Q8WXD2 468 aaKnown RBP17.14■□□□□ 0.33
HERC3-214ENST00000601319 ZCCHC14Q8WYQ9 949 aaKnown RBP17.14■□□□□ 0.33
HERC3-214ENST00000601319 ALG3Q92685 438 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 NAT6Q93015 286 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 ABCG8Q9H221 673 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 NFKBIL1Q9UBC1 381 aaPredicted RBP17.14■□□□□ 0.33
HERC3-214ENST00000601319 SLC17A4Q9Y2C5 497 aa17.14■□□□□ 0.33
HERC3-214ENST00000601319 A0A0U1RQS6 177 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms