RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 HSD11B1LQ7Z5J1 315 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 TECPR1Q7Z6L1 1165 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 TSPAN33Q86UF1 283 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 NLRP8Q86W28 1048 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 GATAD2AQ86YP4 633 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 CDKL3Q8IVW4 592 aaPredicted RBP16.18■□□□□ 0.18
LSM4-206ENST00000600289 ZNF567Q8N184 647 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 TTC13Q8NBP0 860 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 ATL2Q8NHH9 583 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 BTN2A2Q8WVV5 523 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 NUS1Q96E22 293 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 FCRL5Q96RD9 977 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 RBM15Q96T37 977 aaKnown RBP eCLIP16.18■□□□□ 0.185e-7■■■■□ 23.6
LSM4-206ENST00000600289 APOOQ9BUR5 198 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 PACSIN2Q9UNF0 486 aaPredicted RBP16.18■□□□□ 0.18
LSM4-206ENST00000600289 CSNK1G3Q9Y6M4 447 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 HECTD1Q9ULT8 2610 aa16.18■□□□□ 0.18
LSM4-206ENST00000600289 A8MX80 341 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 TNFSF14O43557 240 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 TSHRP16473 764 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 STC1P52823 247 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 CDKN3Q16667 212 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 QPCTQ16769 361 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 MEI1Q5TIA1 1274 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 PNCKQ6P2M8 343 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 KDM7AQ6ZMT4 941 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 B4GALNT4Q76KP1 1039 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 SLC25A45Q8N413 288 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.17■□□□□ 0.18
LSM4-206ENST00000600289 PLA2G15Q8NCC3 412 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 LPCAT1Q8NF37 534 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 CRELD1Q96HD1 420 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 ALS2CR12Q96Q35 445 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 FERMT1Q9BQL6 677 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 CCDC86Q9H6F5 360 aaKnown RBP16.17■□□□□ 0.18
LSM4-206ENST00000600289 DNAJC28Q9NX36 388 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 TOR4AQ9NXH8 423 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 FTSJ1Q9UET6 329 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 RAXQ9Y2V3 346 aa16.17■□□□□ 0.18
LSM4-206ENST00000600289 URB1O60287 2271 aaKnown RBP16.17■□□□□ 0.18
LSM4-206ENST00000600289 RGSL1A5PLK6 1076 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 GOLGA6L9A6NEM1 432 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 H7C0C1 242 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 PCCBP05166 539 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 C1SP09871 688 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 GIMD1P0DJR0 217 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 RBP3P10745 1247 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 NFKB1P19838 968 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 HTR1BP28222 390 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 RBL1P28749 1068 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 ETV3P41162 512 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 ATP5OP48047 213 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 EIF3EP60228 445 aaKnown RBP16.16■□□□□ 0.18
LSM4-206ENST00000600289 PTSQ03393 145 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 CDK18Q07002 472 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 ZNF211Q13398 564 aaPredicted RBP16.16■□□□□ 0.18
LSM4-206ENST00000600289 NRSN1Q8IZ57 195 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 ZNF548Q8NEK5 533 aaPredicted RBP16.16■□□□□ 0.18
LSM4-206ENST00000600289 OR4C6Q8NH72 309 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 MDM1Q8TC05 714 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 FUBP1Q96AE4 644 aaKnown RBP16.16■□□□□ 0.18
LSM4-206ENST00000600289 SRPK1Q96SB4 655 aaKnown RBP16.16■□□□□ 0.18
LSM4-206ENST00000600289 MLPHQ9BV36 600 aaPredicted RBP16.16■□□□□ 0.18
LSM4-206ENST00000600289 TEX101Q9BY14 249 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 CARD9Q9H257 536 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 NLGN3Q9NZ94 848 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 KLHL8Q9P2G9 620 aaPredicted RBP16.16■□□□□ 0.18
LSM4-206ENST00000600289 FAM153AQ9UHL3 310 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 KLF15Q9UIH9 416 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 APOBEC2Q9Y235 224 aaKnown RBP16.16■□□□□ 0.18
LSM4-206ENST00000600289 PPP2R2CQ9Y2T4 447 aa16.16■□□□□ 0.18
LSM4-206ENST00000600289 LOC285095A0A1B0GVY8 99 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 NEMP2A6NFY4 417 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 CACNB4O00305 520 aaPredicted RBP16.15■□□□□ 0.18
LSM4-206ENST00000600289 TNFRSF10CO14798 259 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 SCAMP1O15126 338 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 SDC3O75056 442 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 NDST3O95803 873 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 MT-CYBP00156 380 aaPredicted RBP16.15■□□□□ 0.18
LSM4-206ENST00000600289 EPOP01588 193 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 PYGLP06737 847 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 FTH1P19P0C7X4 201 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 JUNDP17535 347 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 KELP23276 732 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 BLKP51451 505 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 MPP3Q13368 585 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 PTPRRQ15256 657 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 PROX2Q3B8N5 592 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 ITPRIPL1Q6GPH6 555 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 KDELC1Q6UW63 502 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 Q6ZVL8 140 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 PHACTR4Q8IZ21 702 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 EID2Q8N6I1 236 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 TRIM58Q8NG06 486 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 SPATA22Q8NHS9 363 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 ADAMTS14Q8WXS8 1223 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 PDLIM2Q96JY6 352 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 WDR92Q96MX6 357 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 SMIM14Q96QK8 99 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 GBA3Q9H227 469 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms