RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 SLC26A9Q7LBE3 791 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 SLC47A2Q86VL8 602 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 ARHGEF19Q8IW93 802 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 PELI3Q8N2H9 469 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 AOPEPQ8N6M6 819 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 CBX8Q9HC52 389 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 NDFIP2Q9NV92 336 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 FANCLQ9NW38 375 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 SIDT1Q9NXL6 827 aaKnown RBP17.6■□□□□ 0.41
SSBP4-207ENST00000600244 RRN3Q9NYV6 651 aa17.6■□□□□ 0.41
SSBP4-207ENST00000600244 PPARGC1AQ9UBK2 798 aaKnown RBP17.6■□□□□ 0.41
SSBP4-207ENST00000600244 LRCH4O75427 683 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 RECQL5O94762 991 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-207ENST00000600244 MAP3K6O95382 1288 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 NFKBIAP25963 317 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 CCDC40Q4G0X9 1142 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 CPZQ66K79 652 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 SLC6A19Q695T7 634 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 SLC30A9Q6PML9 568 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 GALNT6Q8NCL4 622 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 ZNF397Q8NF99 534 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-207ENST00000600244 RANBP9Q96S59 729 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 ULBP3Q9BZM4 244 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 TSPY26PQ9H489 355 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 MAP10Q9P2G4 905 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 PCDHGB7Q9Y5F8 929 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 SVILO95425 2214 aa17.59■□□□□ 0.41
SSBP4-207ENST00000600244 SMTNL1A8MU46 457 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 PDE2AO00408 941 aaPredicted RBP17.58■□□□□ 0.4
SSBP4-207ENST00000600244 INSIG1O15503 277 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 CEACAM5P06731 702 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 GM2AP17900 193 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 FASLGP48023 281 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 CTBSQ01459 385 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 TPD52L1Q16890 204 aaPredicted RBP17.58■□□□□ 0.4
SSBP4-207ENST00000600244 PNCKQ6P2M8 343 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 ZNF761Q86XN6 746 aaPredicted RBP17.58■□□□□ 0.4
SSBP4-207ENST00000600244 RBMXL3Q8N7X1 1067 aaKnown RBP17.58■□□□□ 0.4
SSBP4-207ENST00000600244 OR10G6Q8NH81 332 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 SNRNP40Q96DI7 357 aaKnown RBP17.58■□□□□ 0.4
SSBP4-207ENST00000600244 AHCYL2Q96HN2 611 aaKnown RBP17.58■□□□□ 0.4
SSBP4-207ENST00000600244 MFRPQ9BY79 579 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 WDR26Q9H7D7 661 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 ACP6Q9NPH0 428 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 ZNF451Q9Y4E5 1061 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 ABCA2Q9BZC7 2435 aa17.58■□□□□ 0.4
SSBP4-207ENST00000600244 A6NCN8 305 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 DPM1O60762 260 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 CEACAM4O75871 244 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 TMCC1O94876 653 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 IGSF6O95976 241 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 F9P00740 461 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 EEF1GP26641 437 aaKnown RBP17.57■□□□□ 0.4
SSBP4-207ENST00000600244 CCL11P51671 97 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 SLC6A3Q01959 620 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 DEUP1Q05D60 604 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 RALGDSQ12967 914 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 DNASE1L3Q13609 305 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 TCP11X2Q5H9J9 407 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 ERAP2Q6P179 960 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 APTXQ7Z2E3 356 aaKnown RBP17.57■□□□□ 0.4
SSBP4-207ENST00000600244 NETO2Q8NC67 525 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 PTCD2Q8WV60 388 aaKnown RBP17.57■□□□□ 0.4
SSBP4-207ENST00000600244 THAP4Q8WY91 577 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 PNPLA2Q96AD5 504 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 RNF31Q96EP0 1072 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 MAGEH1Q9H213 219 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 SUV39H2Q9H5I1 410 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 SUDS3Q9H7L9 328 aaPredicted RBP17.57■□□□□ 0.4
SSBP4-207ENST00000600244 ASF1BQ9NVP2 202 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 HPCAL4Q9UM19 191 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 ATP8A1Q9Y2Q0 1164 aa17.57■□□□□ 0.4
SSBP4-207ENST00000600244 SPG11Q96JI7 2443 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 A0A1B0GTL3 188 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 HEATR9A2RTY3 570 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 ANKUB1A6NFN9 424 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 LRRC10BA6NIK2 292 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 THAP12O43422 761 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 KDELR3O43731 214 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 BUB1BO60566 1050 aaPredicted RBP17.56■□□□□ 0.4
SSBP4-207ENST00000600244 PIGNO95427 931 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 ERBB2P04626 1255 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 MYCLP1P12525 358 aaPredicted RBP17.56■□□□□ 0.4
SSBP4-207ENST00000600244 NDST2P52849 883 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 CHAF1BQ13112 559 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 PEX6Q13608 980 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 TESK1Q15569 626 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 CHRNA6Q15825 494 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 HSP90AA4PQ58FG1 418 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.56■□□□□ 0.4
SSBP4-207ENST00000600244 LIPIQ6XZB0 460 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 LUZP1Q86V48 1076 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 NLRP14Q86W24 1093 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 ZSWIM9Q86XI8 627 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 LURAP1Q96LR2 239 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 TBCBQ99426 244 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 SLC38A3Q99624 504 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 FRMD8Q9BZ67 464 aaPredicted RBP17.56■□□□□ 0.4
SSBP4-207ENST00000600244 ZMYND15Q9H091 742 aa17.56■□□□□ 0.4
SSBP4-207ENST00000600244 RUBCNLQ9H714 662 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms