RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 KELP23276 732 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 TRIM23P36406 574 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 STC1P52823 247 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 KIAA1024LP59773 190 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 SRP54P61011 504 aaKnown RBP28.15■■■□□ 2.1
SSBP4-206ENST00000599699 DNAJC3Q13217 504 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 ALG11Q2TAA5 492 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 ZNF662Q6ZS27 426 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 RFLNAQ6ZTI6 216 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 CHCHD4Q8N4Q1 142 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 TTC13Q8NBP0 860 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 CCHCR1Q8TD31 782 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 UBE2Q2Q8WVN8 375 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 AP2M1Q96CW1 435 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 LYSMD1Q96S90 227 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 PHPT1Q9NRX4 125 aaPredicted RBP28.15■■■□□ 2.1
SSBP4-206ENST00000599699 NLGN3Q9NZ94 848 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 PPP2R2CQ9Y2T4 447 aa28.15■■■□□ 2.1
SSBP4-206ENST00000599699 PDE2AO00408 941 aaPredicted RBP28.14■■■□□ 2.1
SSBP4-206ENST00000599699 KCNN4O15554 427 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 HYAL3O43820 417 aaPredicted RBP28.14■■■□□ 2.1
SSBP4-206ENST00000599699 RASGRP1O95267 797 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 TOP3BO95985 862 aaKnown RBP28.14■■■□□ 2.1
SSBP4-206ENST00000599699 CTSEP14091 401 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 SPINK2P20155 84 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 C1orf61Q13536 156 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 RPS6KA1Q15418 735 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 SEL1L2Q5TEA6 688 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 HEATR4Q86WZ0 1026 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 OR56A4Q8NGH8 313 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 FCRL5Q96RD9 977 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 ABCG8Q9H221 673 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 TOR4AQ9NXH8 423 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 MOSPD1Q9UJG1 213 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 CSNK1G3Q9Y6M4 447 aa28.14■■■□□ 2.1
SSBP4-206ENST00000599699 TDRD6O60522 2096 aaKnown RBP28.14■■■□□ 2.09
SSBP4-206ENST00000599699 NDST3O95803 873 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 HOXC4P09017 264 aaPredicted RBP28.13■■■□□ 2.09
SSBP4-206ENST00000599699 PIRTP0C851 137 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 GPR1P46091 355 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 HK3P52790 923 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 WNT3AP56704 352 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 DAB2P98082 770 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 TCEA2Q15560 299 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 ITPRIPL1Q6GPH6 555 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 SCAMP4Q969E2 229 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 LRRC61Q9BV99 259 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 DUSP23Q9BVJ7 150 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 LGR4Q9BXB1 951 aa28.13■■■□□ 2.09
SSBP4-206ENST00000599699 TMEM202A6NGA9 273 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 TNFP01375 233 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 SLC4A1P02730 911 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 MYCLP1P12525 358 aaPredicted RBP28.12■■■□□ 2.09
SSBP4-206ENST00000599699 CKMT2P17540 419 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 DPTQ07507 201 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 DEFB133Q30KQ1 61 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 MEI1Q5TIA1 1274 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 NYAP1Q6ZVC0 841 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 LYSMD3Q7Z3D4 306 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 NRSN1Q8IZ57 195 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 IPMKQ8NFU5 416 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 ADAMTS14Q8WXS8 1223 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 PKD2L2Q9NZM6 624 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 DOLKQ9UPQ8 538 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 SHOC2Q9UQ13 582 aa28.12■■■□□ 2.09
SSBP4-206ENST00000599699 GCATO75600 419 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 ZNF189O75820 626 aaPredicted RBP28.11■■■□□ 2.09
SSBP4-206ENST00000599699 SHC2P98077 582 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 CDKN3Q16667 212 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 PROX2Q3B8N5 592 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 KDELC1Q6UW63 502 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 ZNF765Q7L2R6 523 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 RAB44Q7Z6P3 723 aaPredicted RBP28.11■■■□□ 2.09
SSBP4-206ENST00000599699 OR1E3Q8WZA6 343 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 PDXPQ96GD0 296 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 OXNAD1Q96HP4 312 aaPredicted RBP28.11■■■□□ 2.09
SSBP4-206ENST00000599699 TBATAQ96M53 351 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 RIOK2Q9BVS4 552 aaKnown RBP28.11■■■□□ 2.09
SSBP4-206ENST00000599699 SCNM1Q9BWG6 230 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 TEX101Q9BY14 249 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 GPR63Q9BZJ6 419 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 GBA3Q9H227 469 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 ZFYVE1Q9HBF4 777 aa28.11■■■□□ 2.09
SSBP4-206ENST00000599699 TCRBV7S2A1N4TA0A589 114 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 ANXA6P08133 673 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 GIMD1P0DJR0 217 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 CDK3Q00526 305 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 KLF1Q13351 362 aaPredicted RBP28.1■■■□□ 2.09
SSBP4-206ENST00000599699 MPP3Q13368 585 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 ELOCQ15369 112 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 ANKRD20A2Q5SQ80 823 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 ANKRD20A1Q5TYW2 823 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 ANKRD20A3Q5VUR7 823 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 FSTL5Q8N475 847 aaPredicted RBP28.1■■■□□ 2.09
SSBP4-206ENST00000599699 SLC25A41Q8N5S1 370 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 TRIM58Q8NG06 486 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 FSD1LQ9BXM9 530 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 MAGEE1Q9HCI5 957 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 FGF22Q9HCT0 170 aa28.1■■■□□ 2.09
SSBP4-206ENST00000599699 MRPL40Q9NQ50 206 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms