RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 ZNF235Q14590 738 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 MAP9Q49MG5 647 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 PHF19Q5T6S3 580 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 PSTKQ8IV42 348 aaKnown RBP14.67□□□□□ -0.06
IRF3-223ENST00000599223 GPBAR1Q8TDU6 330 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 PDCD6IPQ8WUM4 868 aaKnown RBP14.67□□□□□ -0.06
IRF3-223ENST00000599223 ZNF599Q96NL3 588 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 CSPG4P5Q96PW8 444 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 TEX101Q9BY14 249 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.67□□□□□ -0.06
IRF3-223ENST00000599223 TAAR2Q9P1P5 351 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 MYO1AQ9UBC5 1043 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 HECTD1Q9ULT8 2610 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 CAPN8A6NHC0 703 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 H3BRJ5 948 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 MAFKO60675 156 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 FGF1P05230 155 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 SKILP12757 684 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 CSF2RBP32927 897 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 PRKCIP41743 596 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 GNPDA1P46926 289 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 MAPK10P53779 464 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 POLR2LP62875 67 aaKnown RBP14.66□□□□□ -0.06
IRF3-223ENST00000599223 ARHGEF7Q14155 803 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 IHHQ14623 411 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 AMZ1Q400G9 498 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 PPP1R2P3Q6NXS1 205 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 SLC30A9Q6PML9 568 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 ZNF574Q6ZN55 896 aaPredicted RBP14.66□□□□□ -0.06
IRF3-223ENST00000599223 Q6ZVL8 140 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 POLNQ7Z5Q5 900 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 CBARPQ8N350 705 aaPredicted RBP14.66□□□□□ -0.06
IRF3-223ENST00000599223 RCBTB1Q8NDN9 531 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 HSPH1Q92598 858 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 EXTL1Q92935 676 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 USP7Q93009 1102 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 MCCC1Q96RQ3 725 aaPredicted RBP14.66□□□□□ -0.06
IRF3-223ENST00000599223 NUDCD1Q96RS6 583 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 ZWILCHQ9H900 591 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 SUFUQ9UMX1 484 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 PLEKHM1Q9Y4G2 1056 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 PCDHGA4Q9Y5G9 962 aa14.66□□□□□ -0.06
IRF3-223ENST00000599223 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.65□□□□□ -0.06
IRF3-223ENST00000599223 CYSRT1A8MQ03 144 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 SLC28A2O43868 658 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 PGLSO95336 258 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 ECEL1O95672 775 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 GZMAP12544 262 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 CCL4P13236 92 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 CTPS1P17812 591 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 PCK1P35558 622 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 RENBPP51606 427 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 CYP4F2P78329 520 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 SLC25A11Q02978 314 aaKnown RBP14.65□□□□□ -0.06
IRF3-223ENST00000599223 NR1D2Q14995 579 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 IQCB1Q15051 598 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 TMCO3Q6UWJ1 677 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 TRIM74Q86UV6 250 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 DTX1Q86Y01 620 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 ATPAF2Q8N5M1 289 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 LZTR1Q8N653 840 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 KIAA1524Q8TCG1 905 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 ZDHHC1Q8WTX9 485 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 HTR3CQ8WXA8 447 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 TRIM44Q96DX7 344 aaPredicted RBP14.65□□□□□ -0.06
IRF3-223ENST00000599223 SGF29Q96ES7 293 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 BTBD6Q96KE9 485 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 PHPT1Q9NRX4 125 aaPredicted RBP14.65□□□□□ -0.06
IRF3-223ENST00000599223 AIPL1Q9NZN9 384 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 SLC17A4Q9Y2C5 497 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 MAST4O15021 2626 aa14.65□□□□□ -0.06
IRF3-223ENST00000599223 UBR5O95071 2799 aaPredicted RBP14.64□□□□□ -0.07
IRF3-223ENST00000599223 IGHV5-10-1A0A0J9YXX1 117 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 GOLGA6CA6NDK9 693 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 GOLGA6BA6NDN3 693 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 CPNE6O95741 557 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 PDHA1P08559 390 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 FAM87AP0C7U9 286 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 GOLGA6DP0CG33 693 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 RARAP10276 462 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 ALDH4A1P30038 563 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 HSPA9P38646 679 aaKnown RBP14.64□□□□□ -0.07
IRF3-223ENST00000599223 ZNF135P52742 658 aaPredicted RBP14.64□□□□□ -0.07
IRF3-223ENST00000599223 NFKB2Q00653 900 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 ILF3Q12906 894 aaKnown RBP eCLIP14.64□□□□□ -0.07
IRF3-223ENST00000599223 NFATC3Q12968 1075 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 TSR1Q2NL82 804 aaKnown RBP14.64□□□□□ -0.07
IRF3-223ENST00000599223 RAET1GQ6H3X3 334 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 DOK6Q6PKX4 331 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 USP53Q70EK8 1073 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 CPNE8Q86YQ8 564 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 NAGSQ8N159 534 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 JPH3Q8WXH2 748 aaPredicted RBP14.64□□□□□ -0.07
IRF3-223ENST00000599223 TMEM159Q96B96 161 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 CCDC74BQ96LY2 380 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 NAP1L5Q96NT1 182 aaPredicted RBP14.64□□□□□ -0.07
IRF3-223ENST00000599223 CMKLR1Q99788 373 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 GSDMCQ9BYG8 508 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 TRIM4Q9C037 500 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 PCDH18Q9HCL0 1135 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms