RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 COPAP53621 1224 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 PTPN5P54829 565 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 ZXDAP98168 799 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 CNTN1Q12860 1018 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 ILF2Q12905 390 aaKnown RBP15.44■□□□□ 0.06
UPF1-206ENST00000598471 PTPRRQ15256 657 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 CDKN3Q16667 212 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 LGSNQ5TDP6 509 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 MRNIPQ6NTE8 343 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 TSPAN33Q86UF1 283 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 TMPRSS6Q8IU80 811 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 RAVER1Q8IY67 606 aaKnown RBP15.44■□□□□ 0.06
UPF1-206ENST00000598471 CBARPQ8N350 705 aaPredicted RBP15.44■□□□□ 0.06
UPF1-206ENST00000598471 OR4L1Q8NH43 312 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 GANCQ8TET4 914 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 SIPA1Q96FS4 1042 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 CDKN2AIPNLQ96HQ2 116 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 TBATAQ96M53 351 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 CPNE1Q99829 537 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 POLMQ9NP87 494 aaPredicted RBP15.44■□□□□ 0.06
UPF1-206ENST00000598471 ZNF180Q9UJW8 692 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 APPL1Q9UKG1 709 aa15.44■□□□□ 0.06
UPF1-206ENST00000598471 IQANK1A0A1B0GTG1 560 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 CCDC162PA2VCL2 907 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 RGSL1A5PLK6 1076 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 FAM170BA6NMN3 283 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 GOLGA8KD6RF30 607 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 STK25O00506 426 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 ACADMP11310 421 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 LHCGRP22888 699 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 CNTFP26441 200 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 ARNTP27540 789 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 SPAM1P38567 509 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 GP5P40197 560 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 ARSDP51689 593 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 DGKEP52429 567 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 CSE1LP55060 971 aaKnown RBP15.43■□□□□ 0.06
UPF1-206ENST00000598471 PTPRCAPQ14761 206 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 SMAD1Q15797 465 aaKnown RBP15.43■□□□□ 0.06
UPF1-206ENST00000598471 CRY1Q16526 586 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 FASTKD1Q53R41 847 aaKnown RBP15.43■□□□□ 0.06
UPF1-206ENST00000598471 AARS2Q5JTZ9 985 aaKnown RBP15.43■□□□□ 0.06
UPF1-206ENST00000598471 TEDDM1Q5T9Z0 273 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 ZNF470Q6ECI4 717 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 KIAA0408Q6ZU52 694 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 SDCCAG8Q86SQ7 713 aaPredicted RBP15.43■□□□□ 0.06
UPF1-206ENST00000598471 CACUL1Q86Y37 369 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 CNTN4Q8IWV2 1026 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 ZNF687Q8N1G0 1237 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 HDDC3Q8N4P3 179 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 CXorf40AQ8TE69 158 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 SCG3Q8WXD2 468 aaKnown RBP15.43■□□□□ 0.06
UPF1-206ENST00000598471 PGM2Q96G03 612 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 SGSM3Q96HU1 749 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 SH3GL2Q99962 352 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 DHRS4Q9BTZ2 278 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 OSBPL6Q9BZF3 934 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 CDH19Q9H159 772 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 TBC1D17Q9HA65 648 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 BPIFA1Q9NP55 256 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 SMYD2Q9NRG4 433 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 CATSPERZQ9NTU4 200 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 IL1RAPL1Q9NZN1 696 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 LGALS13Q9UHV8 139 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 FKBPLQ9UIM3 349 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 GGT7Q9UJ14 662 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 NCKAP1Q9Y2A7 1128 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 SLC30A1Q9Y6M5 507 aa15.43■□□□□ 0.06
UPF1-206ENST00000598471 TCRBV21S2A2A0A5A6 115 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 CXorf49A8MYA2 514 aaPredicted RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 GOLGA8TH3BQL2 631 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 CCL22O00626 93 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 AREL1O15033 823 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 CD3EAPO15446 510 aaKnown RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 AP1G1O43747 822 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 RNASEH2AO75792 299 aaKnown RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 KRT37O76014 449 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 KRT38O76015 456 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 GOT2P00505 430 aaKnown RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 C1SP09871 688 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 ITGALP20701 1170 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 OGNP20774 298 aaKnown RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 MC4RP32245 332 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 DRD3P35462 400 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 PPARGP37231 505 aaPredicted RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 METAP1P53582 386 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 SEMG2Q02383 582 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 RALGDSQ12967 914 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 TMED2Q15363 201 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 TMEM52BQ4KMG9 183 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 PIP5KL1Q5T9C9 394 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 GRTP1Q5TC63 336 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 AGBL2Q5U5Z8 902 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 ADGRD1Q6QNK2 874 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 KIAA1324Q6UXG2 1013 aaKnown RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 PACS1Q6VY07 963 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.42■□□□□ 0.06
UPF1-206ENST00000598471 Q6ZS52 159 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 SYT13Q7L8C5 426 aa15.42■□□□□ 0.06
UPF1-206ENST00000598471 PTAR1Q7Z6K3 402 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms